| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1317 |
|---|
| Symbol | |
|---|
| ID | 6980044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 1343420 |
|---|
| End bp | 1344313 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643396037 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002280837 |
|---|
| Protein GI | 209548920 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0188901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.208154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC GAATTCTGTT TACGGGCGGT TCGGGCAAGG CAGGTCGCCA TACCGTGCCA
TGGCTCGTCA ATGCGGGTTA CGAGGTTCAC AACCTCGATC TGGTGCCGCT GGACAGTCCC
GGAGTCACCA ATCTCATTGC CGACATCACC GATAGCGGCC AGGTCTTCAA CGCGCTGTCG
ATGCACCGCG ATTTTCCCGA TCTCGATGCG GGCAGGGGCG TGCAGCCCTT CGATGCCGTC
GTGCATTTCG CCGCCATCCC GCGCATTCTG ATCAAGCCCG ACAACGAGAC TTTCCGCATC
AACACGATGG GCACTTATAA TGTCATCGAG GCGGCGGTGA AGCTCGGCAT CAGGAAGATT
ATCGTCGCGT CCAGCGAGAC GACCTACGGC GTCTGCTTCG CCGAAGGCCA TCGCGATTTC
CACCAGTTCC CGCTGGAGGA AGACTACGAC GTCAATCCGA TGGATTCCTA CGGGCTTTCC
AAGGTGGTCA ACGAAAAGAC GGCGCGCGCC TTTGCCGAGC GTTCGGGCTT TGACATCTAT
GCGCTGCGCA TCGGCAACGT CATCGAGCCG CATGAATATG AGAGGTTCCC CACCTATTTC
GCCAATCCCG AGATGCGCAA ACGCATCGCC TGGAGCTATA TCGACGCCCG CGATCTCGGG
CAGATCTGCC ATCTCTGCAT CGAAAAGGAC GGTCTCGGCT ATCAGGTCTT CAATGCGGCC
AACGATACCG TCTCGGCCAA TACGCCGTCG AGGGAGCTTG CCAAGCGATT CTTCCCCAAC
GTGCCCTTCA CCCGCGAGAT CGGCGAATAT GAAGGCCTGC TCTCCAACCG TAAGATTCGC
GAGGTGCTCG GTTTTAAAGA AGAGCACGAT TGGCGGAAAT ACGTGAAGGT CTGA
|
|---|
| Protein sequence | MKKRILFTGG SGKAGRHTVP WLVNAGYEVH NLDLVPLDSP GVTNLIADIT DSGQVFNALS
MHRDFPDLDA GRGVQPFDAV VHFAAIPRIL IKPDNETFRI NTMGTYNVIE AAVKLGIRKI
IVASSETTYG VCFAEGHRDF HQFPLEEDYD VNPMDSYGLS KVVNEKTARA FAERSGFDIY
ALRIGNVIEP HEYERFPTYF ANPEMRKRIA WSYIDARDLG QICHLCIEKD GLGYQVFNAA
NDTVSANTPS RELAKRFFPN VPFTREIGEY EGLLSNRKIR EVLGFKEEHD WRKYVKV
|
|---|
| |