Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0975 |
Symbol | |
ID | 6979693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 995189 |
End bp | 996553 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643395686 |
Product | multi antimicrobial extrusion protein MatE |
Protein accession | YP_002280495 |
Protein GI | 209548578 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.54938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC TTTCAGAAGG CAATGCCTTT CTCACCGGCT GGTTGCCGGG CGTCTTCATC AGGACGGCGG CGCCGATCGT CGCGATCACC ACCGTCAACG GCCTCTTCAC CGTCGTCGAC GCCTATTTCC TCGGCGCCTA TGTCGGCCCC GACGCGCTCT CCGCCGTCAG CCTGATCTTC CCGGGGCTGA TGCTGCTGAT CGCCCTGCAA TCGCTCGTCT CGAACGGCAT GGCGAGCATC CTCGCCCGCC GGCTCGGGGC CGGCGATCGC CGGGGCGCGG GCCGGGTATT TGCCGGGGCC CATATGCTGG CGCTGGCCGT CACGCTCGTC CTCAACATCC TCTACTGGAC CCTGGGGCGG CAGATCATCG ACGCCGGTGC CGGCACGGCC GCCGTGGCCG AGGGCGCCAG GTTGTTCATG GGCGCGATGA TCGCCTTTGC GCCAGTGAGC TTCTTCCTGT CGCTGCATCT CGACGGATTG CGCTGCGAGG GCAAGATCGG CTTCATGACG CTGGTGACGC TGACGGCCTC GCTGCTCAAC ATCTTCGCCA ACTGGCTGTT CATGGCGGTG ATGCATTGGG GCGTGCTCGG TTCGGCTGCC GGCTCCATCG CCGCGCAATT CGTCTGTCTC GCCGCCGTGC TCGCCTATCG CTGGCGCCGG CCGGCGGCAC TCAGGCCTTA CCGAGGATTC GCCCTTGCCG AATGGCGCGG CATCGTCGCC TTCGGCGCGC CGATGAGCCT TGGCTTCATC GGCATATCGC TGGCATCCGC CGCCATTCTC GTCAATATCT CGCTCTGGAG CACGCATGAT CATGTCGCGA CGGTCGCCGC CTACGGCATC ATCACCCGGA TCATGACCTT CACCTATCTG CCGCTGCTCG GTCTCAGCAT CGCCTTGCAG ACGATTGCCG GCAACAATCA CGGCGCCGGC CTTGGTCTTC GCGTCGGCCG CAGCCTGCAG ATCGCCATGC TTGCGGCGCT CGTCTATTGC AGTCTGGTCG AGATCGCCGT CGAACTGCTG GCCGGCCGTC TCGGCGCCGT CTTCGTCGCC GATCCTGCCA TTGTCGCCGA GGTCAGGCGA ATCCTGCCCT GGACGATCGG CGCCTATTTT CTCTTCGGGC AGATGCTGAT CCTGTCGTCC TATTTCCAGT CGATCGGCGA TGCGTCGCGC GCGGCGATCT TCGGCCTGTC GCGGCCTTAT CTCTTCACCC TGCCGCTCAC CTTCCTGCTG CCCTTCGTCT TCGGCGAGCA GGGGATCTGG ATGGTGCCGG TCTTTGCCGA GGCAGGCATG TTCATCCTGG CCTTTCTGGT GCTGTCGCAG AATGCCAGGC ACCGCGGCTG GCGGTACGGG CTTCTGCCCG CCTGA
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Protein sequence | MTDLSEGNAF LTGWLPGVFI RTAAPIVAIT TVNGLFTVVD AYFLGAYVGP DALSAVSLIF PGLMLLIALQ SLVSNGMASI LARRLGAGDR RGAGRVFAGA HMLALAVTLV LNILYWTLGR QIIDAGAGTA AVAEGARLFM GAMIAFAPVS FFLSLHLDGL RCEGKIGFMT LVTLTASLLN IFANWLFMAV MHWGVLGSAA GSIAAQFVCL AAVLAYRWRR PAALRPYRGF ALAEWRGIVA FGAPMSLGFI GISLASAAIL VNISLWSTHD HVATVAAYGI ITRIMTFTYL PLLGLSIALQ TIAGNNHGAG LGLRVGRSLQ IAMLAALVYC SLVEIAVELL AGRLGAVFVA DPAIVAEVRR ILPWTIGAYF LFGQMLILSS YFQSIGDASR AAIFGLSRPY LFTLPLTFLL PFVFGEQGIW MVPVFAEAGM FILAFLVLSQ NARHRGWRYG LLPA
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