Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0247 |
Symbol | |
ID | 6978961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 250278 |
End bp | 251993 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643394960 |
Product | type I secretion system ATPase |
Protein accession | YP_002279773 |
Protein GI | 209547856 |
COG category | [R] General function prediction only |
COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAA TTTCCATAAA ACCACCGCGA CCACCGACAC AGCTCGTTGT TGCGCTCCGG GCTTGCGCCG GGGCCTTCGG GTTGGTCTTC CTTTACAGCT GCGGCTATAA TCTTTTTCTT CTCACGCCTT CCATCTATCT CCTGCAGATC TACGACAGGG TCCTGTCGAG CCGAAGCGTC GACACGCTGC TGATGCTGAC GATGATCATC GCCATCGCCG TGTTGGTCGG GTCGACGCTC GATATCGTGC GCAGGGCAGC TCTTTCGCGC ATCGGCAGCT GGCTGGACCA TAGGCTGCGG CCCATGGTGC TCACCGCATC GTTCGAATAT GCCGCTCGCG CCGATACGGG AGCCGCCTCG GAGTGCTACA GGGATCTCGC CGCATTGCGC CAGTTCCTCG ATTCACCGGC CAGCTCGCTT CTGTTCGACG TTCCCTGGGC GCCGGTATTC CTGCTTCTGC TCTTTCTTGT TCACCCGCTG CTTGGGACCA TCGGTCTTCT GTGCGCCGTT GCGCTGCTGC TGTTTGCGTT GGCAACGGAA CTGGCGACGC GGGCGCCGCT TGCCCACGCC AATCTTGCCC TTTCGAGGAG CTATCTGCGA TTTGCGAGCG CGCTGAAAAA CATCGAGGTG ATCCGGGCCA TGGGCATGCA GGACGGTGCA GCCCTGATCG TCTATCGCGA TGCGGAAATG GCAAGAAGGG CCCAGGACAT CGCGATGCAT CGCACGGAGA TCATCCTTGG TTTCTCCAAA TCGATCCGCA CCTTGGCGCA GATCCTGATG ATGGGATCGG CGACCTGGCT GGTGCTCGTC AACAGCGGCA GTCCCGGAAT CATCTTCGTC GCCAGCCTGC TGCTCGGGCG CGGGCTCGCA CCGATCGAGG GCGCAATAGG GGCATGGCGC TCCTTCATGT TTGCGCGCAA TGCCTTCAAT CGCTTGAACA GAATGCTGAT AACAATTGCA TCGGAATGCG ATGCCCGCAT GGTGCCGCTG CCGGAACCCA ATGGCCTGGT TCTCGATAAT GTCAGCTATT TCAAGCCATT CGCCGATCGG CCGATATTGA CCGATATCAC ATTGCGCCTG GCACCTGGCG ATTGCATTGC GCTCATCGGT CCGTCGGGAT CGGGAAAATC GACACTGGGC CGCATCATGG CAGGTGTTGT GCCGGCAACG AGCGGATATG CTCTTCTCGG CGGGGTCGAT ATCTCGGCTC TGCGTCTTTG CGGGGGGACC TGCCACGTCG GATATCTGCC GCAGGATATC GAACTCTTCG GCGGAGCAAT CAAGGATGTG ATCGGCCGGC TGGACGGAGG AGATCCCGGC AAGGCAATCG ACGCCGCAAA GCTGGTTGGA TTGCACGACG CGATCATGCG GCTGCCGCAG GGCTACGAGA CCGATATCGG TGAAGGGGGA AACCTGCTCC TTCGGGCTCA GCGCCAACAG CTGGGGCTGG CACGGGCGGC TTACGGAAAT CCGTCCCTCA TCGTTCTCGA TGATCCGAAT TCGAGCCTGG ATTATGACGG CGAACGCATG CTGTTTACGG CAATCGAGCG GATGAGATCC CGGGGGATGA CCGTCGTTAT CATAACCCAC CGGATGGGCA TCCTGCCGGT CACCAACAAG ATTGCCATCA TGCGCAACGG CACGGTGGCT GCCTTCGGCG ACAGCGAGCG GATTTATGAA ACCTATCTTC AACCACCGGC GCGAACGGGA AGCTAG
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Protein sequence | MTTISIKPPR PPTQLVVALR ACAGAFGLVF LYSCGYNLFL LTPSIYLLQI YDRVLSSRSV DTLLMLTMII AIAVLVGSTL DIVRRAALSR IGSWLDHRLR PMVLTASFEY AARADTGAAS ECYRDLAALR QFLDSPASSL LFDVPWAPVF LLLLFLVHPL LGTIGLLCAV ALLLFALATE LATRAPLAHA NLALSRSYLR FASALKNIEV IRAMGMQDGA ALIVYRDAEM ARRAQDIAMH RTEIILGFSK SIRTLAQILM MGSATWLVLV NSGSPGIIFV ASLLLGRGLA PIEGAIGAWR SFMFARNAFN RLNRMLITIA SECDARMVPL PEPNGLVLDN VSYFKPFADR PILTDITLRL APGDCIALIG PSGSGKSTLG RIMAGVVPAT SGYALLGGVD ISALRLCGGT CHVGYLPQDI ELFGGAIKDV IGRLDGGDPG KAIDAAKLVG LHDAIMRLPQ GYETDIGEGG NLLLRAQRQQ LGLARAAYGN PSLIVLDDPN SSLDYDGERM LFTAIERMRS RGMTVVIITH RMGILPVTNK IAIMRNGTVA AFGDSERIYE TYLQPPARTG S
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