Gene Rfer_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3897 
Symbol 
ID3961518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp4350975 
End bp4351616 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID637918722 
ProductTetR family transcriptional regulator 
Protein accessionYP_525127 
Protein GI89902656 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAT CCCCCTCCCG GCCCCGCACC CGCCGGCAAA AAGCCGTCAC GCCCGGCACG 
GACGAAAAAC GCGAGCGCAT CCTCAAGGTG GCCGAGCGCC TGTTCGCGGC CCAGGGTTAC 
GCCAACACCA CGATGGCGCA AATCGTGCGC GAGTTGGAGG TCAGCAAGCC CTTTGTGTAT 
TACTACTTTC ACAACAAGCA GGAGATTTTC GAGACCCTCT CCTGGCGCCC GGCGGTCGCG 
TGCTTCACCA CGATGGACTT TGCCCCGGAT GACCCGCGCC CGGCGCATGT CAAGGTGACC 
GAAGGGCTGG AGCGCCTGAT CCGCGCCACC ATCACGCATT ACCCGGCGGC TTTTTTTGCT 
TACCGCGAAC CTCAGGTGTA CCGCCCGGAG TACCTGGCCG CACAGAAGAA ACTGGCAAAT 
CACTTTTATG AGCGCCTGTG CTCGCTGCTG GAGCAGGGGC GACGCGAGGG CAGCTTCGAC 
TTCACCGAAA CACGCATCAC CGCGCAGGCG GCATGCAGCC TGCCCGGCTT TCTCTACAAC 
TGGTACCGAC CCGACGGCCG CCTGGATCCT GACGCCATGG TGCGCGAGCT CTCCAAACTG 
GCCTGGCGCG TCATCGGCCT GCGTGACACC GGTGCAGGTT GA
 
Protein sequence
MSTSPSRPRT RRQKAVTPGT DEKRERILKV AERLFAAQGY ANTTMAQIVR ELEVSKPFVY 
YYFHNKQEIF ETLSWRPAVA CFTTMDFAPD DPRPAHVKVT EGLERLIRAT ITHYPAAFFA 
YREPQVYRPE YLAAQKKLAN HFYERLCSLL EQGRREGSFD FTETRITAQA ACSLPGFLYN 
WYRPDGRLDP DAMVRELSKL AWRVIGLRDT GAG