Gene Rfer_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3536 
Symbol 
ID3960403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3931570 
End bp3932826 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content62% 
IMG OID637918352 
Productputative phenylacetate-CoA ligase 
Protein accessionYP_524772 
Protein GI89902301 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.756955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAC ATTACGATGC GTTGGAAACG CGCGACCACA CGGCGCGTGA AACTGCCCTG 
ATGACGGCAT TGCCGGCTCA GGTGGCCCAT GCCAGAGATT CATCGGCCGC CTTTCATCAG
ATTTTGCAGG ACGTCAACCC GGCCACGGTG ACCAGTCGGG CGGCCTTGGC GTCGCTGCCC
GTCACGCGCA AGCATGAGTT GCTGGAGCGC CAGCAGGCCA GCCGGGCCGG CGGCGGCAAC
GTGTTTGGCG GCTTCAGCGC GATCGGCTTT GGCGAGCGGA TGCCGCGCGT TTTTGCCAGC
CCCGGCCCCA TTTATGAGCC TGAAGGAGCG GCCAAAGACT ATTGGCGCAT GGCGCGCGCC
ATGTTTGCGG CCGGTTTTCG CCCACGTGAA CTGATTCACA ACAGCTTCAG CTACCACTTT
GTGCCCGCTG GCTCCATGAT GGAATCCGGT GCCCACGCGC TCGGTTGCAC CGTTTTCCCG
GGCGGTACCG GCCAGACAGA GCAGCAAGTG CAAGCCATGC GCGAACTGCA GCCGGCGGGC
TATATTGGGA CACCGAGTTT TCTGAAAATC ATTGTCGACA AGGCGCATGA GATGGGTGTG
GCACTGCCGA GCGTCAAGAA AGCCATGTTT GGCGGTGAAG CCTTTCCGCC ATCCCTGCGG
GACTGGTTTG CCGAGCGCGG CATTGCCGGT TACCAGTGTT ATGCAACCGC TGATCTGGGT
TCGATCGCCT ACGAAACCCC GGCGCGAGAG GGGCTGGTTC TGGATGAAAA TGTGATTGTC
GAGATCGTGC GGCCCGGCAC CGGTGACCCG GTGCAGGACG GTGAAGTGGG TGAAGTGGTG
GTCACGACAT TGAACCCGGA CTATCCGCTC ATTCGCTTCG GCACCGGGGA CTTGTCGGCG
GTGTTGAGCG GCCCCTGCCC GACCGGGCGC ACCAACACGC GCATCAAGGG CTGGCTGGGC
CGGGCTGACC AGACGACCAA AATCCGCGGC ATGTTTGTGC ACCCGGGCCA GATTGCCGAC
ATCATCAAAC GTTTTCCTGA AGTGGCGCGC GCCCGGCTGG TGGTGACAGG TGAGATGGCC
AACGATGTGA TGACGCTCAA GGTGGAGACG GCGTGCAGTG GCCCGGATGC GCTGGCCGCC
AAGATTGGCG AGGCCATTCG GGATGTCACC AAGCTGCGCG GCGCGGTCGA GATCTTGCTG
CCGGGCAGCC TGCCCAATGA TGGCAAGGTG ATTGAGGACG CCCGCAGCTA CCGTTAA
 
Protein sequence
MIEHYDALET RDHTARETAL MTALPAQVAH ARDSSAAFHQ ILQDVNPATV TSRAALASLP 
VTRKHELLER QQASRAGGGN VFGGFSAIGF GERMPRVFAS PGPIYEPEGA AKDYWRMARA
MFAAGFRPRE LIHNSFSYHF VPAGSMMESG AHALGCTVFP GGTGQTEQQV QAMRELQPAG
YIGTPSFLKI IVDKAHEMGV ALPSVKKAMF GGEAFPPSLR DWFAERGIAG YQCYATADLG
SIAYETPARE GLVLDENVIV EIVRPGTGDP VQDGEVGEVV VTTLNPDYPL IRFGTGDLSA
VLSGPCPTGR TNTRIKGWLG RADQTTKIRG MFVHPGQIAD IIKRFPEVAR ARLVVTGEMA
NDVMTLKVET ACSGPDALAA KIGEAIRDVT KLRGAVEILL PGSLPNDGKV IEDARSYR