| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3507 |
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| Symbol | |
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| ID | 3963357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3898836 |
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| End bp | 3899720 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918323 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_524743 |
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| Protein GI | 89902272 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTATC AATCTGTCTT CGCGCCGGGT TTGTTTGCGG GTCAGGTGAT GCTGGTGACG
GGCGGCGGCT CCGGTATTGG CCGTTGCGTG GCGCATGAAC TGGCGGCGCT GGGTGCGCAT
GTGGTGCTGA TCGGGCGCAA GGCCGACAAG CTGCAAAGCG TGGTCGATGA AATCTACCAG
GACGGCGGCG TCGCCAGTTT TCATGTCTGC GACATTCGGC AGGAGCCGAC GGTCAAGCAG
ACGGTAGCGG CCGTGGTGGC CGCGCACGGG CGCATTGACG GCCTGGTCAA CAACGCTGGT
GGCCAGTACA TGATGCCGCT GGAAGCCATC AGCGCCAAAG GCTGGGAGGC GGTGCTCAAC
ACCAACCTGA CCGGTGGTTT TTTGATGGCG CGTGAGTGTT TTTTGCAGTC CATGGCCAAG
CATGGCGGCA GTATCGTCAA TATTGTGGCT GACATGTGGG GCTCCATGCC CGGCATGGGG
CACAGTGGCG CGGCGCGTGC CGGCATGGTG AGTTTCACCG AAACCGCTGC GCTGGAATGG
GCCGGTCGGG GGGTGCGGGT CAATGCGGTG GCGCCCGGCT ACATCGCCTC CAGTGGCATG
GACCATTACC CGCCCGAGAT GGGTCCGATG CTGCGCGAGA TGACCCAGAC CATTCCGTTG
GGACGCTTTG GTACCGAGGC TGAAGCGTCA GCCGGTATTG TTTTTCTGCT CAGCCCTGCG
GCCGCTTTCA TCAGCGGCAG CACGCTGCGC ATCGACGGCG CCCGGCCGCA GGTGCGCATG
GGCTGGCCCA TGCGGGTGGC GTCAAAGGAA GCGTTGCAGC GCGATGCCAT CAAGCCGTTT
AATGGTTTTC ACCGCGCCCA GAGCCCTAAG GTTTTGTCGA TCTGA
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| Protein sequence | MNYQSVFAPG LFAGQVMLVT GGGSGIGRCV AHELAALGAH VVLIGRKADK LQSVVDEIYQ
DGGVASFHVC DIRQEPTVKQ TVAAVVAAHG RIDGLVNNAG GQYMMPLEAI SAKGWEAVLN
TNLTGGFLMA RECFLQSMAK HGGSIVNIVA DMWGSMPGMG HSGAARAGMV SFTETAALEW
AGRGVRVNAV APGYIASSGM DHYPPEMGPM LREMTQTIPL GRFGTEAEAS AGIVFLLSPA
AAFISGSTLR IDGARPQVRM GWPMRVASKE ALQRDAIKPF NGFHRAQSPK VLSI
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