| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3296 |
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| Symbol | |
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| ID | 3962881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3659602 |
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| End bp | 3660693 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918116 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_524536 |
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| Protein GI | 89902065 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.1914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAA ACCTCGTCGC CGCGCTCGCG GCCGCCTGTT TTATTTCTCC CGTTTTTTCG
CAGACTGCTG CGCCGATTGC CGCCCAAGAG CCGCTCAAAA TTGGCTTTGT GTATGTGGCC
CCGCTGCTGG ACACCGGCTG GGTGCGCCAG CACGACGAGG GGCGCCGGGC GCTTGAGGCC
GCCTTGGGTG CCCGGGTCAA AACTACCTAT GTCGAAAACG TGGCCGAAGG GCCGGATGCC
GAGCGTGTGA TCCGCGACCT CGCCGCCAAG GGCCACAAGC TGATTTTCAC GCCCAGCTTT
GGCTACATGG AGCCCACGCT GAAGGTGGCG CAGGAGTTCC CGGACGTCAA GTTCGAATCC
ATCACCGGCT ACAAGACCGC GCCCAACGTG GCGGTGGCCA ACGCGCGCTA CTACGAGGGC
CGCTACCTGG CCGGCATTGC CGCCGGGCGC ATGACGACCA GCCATGTGGC CGGCTACGTG
GCGGGCTTTG CGATTCCCGA AGTGCTGCAA GGCATCAACG CCTTCACCTT GGGCATGCGC
TCGGTGGACC CGAAGGCAGA GGTCAAAGTC GTGTGGCTCA ACACCTGGTT TGACCCCAGC
CGCGAGCGCG ACGCTGCCAT GACGCTGTTC AACCAGAACG TCGATGTGAT TGCTTTTCAC
ACCGGTTCAT CGGCCGTCAT GGTGGCAGCG CAGGAGCGCG GCAGACTGGC CGTGGGCTAC
CACTCGGACA TGCGAAAAAT TGCACCCGAC GCGCAGATCG TCGCCGTCAC CCACCAATGG
GGCCCTTACT ACACCCAGCG CGCGCAAGCG GTGCTCAATG GCAGCTGGAA GAGTGGTCGC
GTCTGGGGTG GCGTGCGTGA GGGCATGATC AAGGTCGAGG GCTTTGGCTC GAAAGTGCCG
AAGGCGGTGC AGCAGGAAGT ACTGGCGCGC CAACAAGACA TGGCCGCAGG CAAGTTGCAC
CCGTTCCAAG CCAGTCAAGC GGTGCGGGAC AATGAGGGCA AAGAAGTCAT CGCCAAAGGC
CGGACACTGA CGGATGAGCA GATTCTCAAG ATGAACTGGC TGGTGCAAGG GGTGCAGGGC
AAGTTGCCTT GA
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| Protein sequence | MYKNLVAALA AACFISPVFS QTAAPIAAQE PLKIGFVYVA PLLDTGWVRQ HDEGRRALEA
ALGARVKTTY VENVAEGPDA ERVIRDLAAK GHKLIFTPSF GYMEPTLKVA QEFPDVKFES
ITGYKTAPNV AVANARYYEG RYLAGIAAGR MTTSHVAGYV AGFAIPEVLQ GINAFTLGMR
SVDPKAEVKV VWLNTWFDPS RERDAAMTLF NQNVDVIAFH TGSSAVMVAA QERGRLAVGY
HSDMRKIAPD AQIVAVTHQW GPYYTQRAQA VLNGSWKSGR VWGGVREGMI KVEGFGSKVP
KAVQQEVLAR QQDMAAGKLH PFQASQAVRD NEGKEVIAKG RTLTDEQILK MNWLVQGVQG
KLP
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