Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2475 |
Symbol | tnaA |
ID | 3960291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2721515 |
End bp | 2722885 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917294 |
Product | tryptophanase |
Protein accession | YP_523723 |
Protein GI | 89901252 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3033] Tryptophanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAAA CCCTGATTGA ACCGTTTCGT ATCAAAAGCG TCGAGCCCAT CCGAATGACC ACCCGACCCG AGCGTGAGCG ACTGCTGGCA GCCGCCAAGC TCAATGTCTT CAAGCTGCGC GCCGAAGACG TGCTGATTGA CTGGCTGACC GATTCCGGCA CCGGCGCCAT GTCCTCCAAA CAATGGGGCG CCATCATGGA GGGCGACGAA AGCTACGCCG GGGCGCGCAG CTTCTACCGG TTAGAGGCCG TGATCCAGGG CATCACCGGC ATGCAGCACT TTGTGCCGAC GCACCAGGGG CGCGCGGCCG AAAAAGTGTT GTTCACCGCC GTCTGCAAAA AGGGCGATCT GGTGCCCAAC AACAGCCACT TCGACACCAC CCGCGCCAAT CTGGAATACC TCGGTGTCGA GGCGGTCGAT CTGGTCATCC CGGAAGGCTT GCAGCCCGCG CTGCTTTACC CGTTCAAGGG CAATATCGAT CTGGCCCGGG TCGAGGCGCT GCTCAAAACC GAGGGCGATC GCATCCCGTT TGGCATGATC ACCGTGACCA ACAACACCGG TGGCGGCCAG CCGGTGTCCA TGGCCAATAT CCGCGCTTAT GCCAAGCTGC TCAAAGCCTA CGGCAAACCC TTGATCATGG ACGTTTGCCG CTTCTCGGAA AACGCCATGT TCATCAAGAT GCGCGAGCCG GGGTACGAAA ACACCCCCAT CAAGCAAATC GTGCAGGAGA TGTTCAGTTA CGCCGACGGG GCCACCATGA GTGCCAAAAA AGACGGCATG GTCAATATCG GCGGCTTCAT CGTGCTGCGC AGCGAAGAGT GGATGGACGC CGTGCGCAAT GTGCTGATCA TGACCGAAGG TTTCCCCACT TACGGCGGGC TGGCCGGGCG TGATCTGGAA GCGCTGGCTG TGGGGCTGGA AGAAGGCATG CAGGAAGACT ATCTGCGCTA CCGCCTGCGC ACGGCAGAGT ACCTGGGCGA GCGGCTGGAA GCTTCGGGCG TGGGCTTTGT CAAACCCACC GGCGGCCACG CGGTTTACAT CGATGCCAAA ACGGTGCTGC CCAACATGCC CATTCAACAT TACCCGGCCT GGGCGTTGTG CAATGCGCTG TATCTGGAGG GTGGCATTCG CGGGGTTGAA ATCGGCTCTG TGATGTTCGG CAAGCGGCTG CTTGACGGCA GCGAGACCTA CCACAGCATG GAACTGGTGC GGCTGGCGTT TCCGCGGCGC ATGTACACGC AGAGCCACTT CGATTACGCC GCCGAGGTGA TTGACGAGGT CAAGCAAAAA GCGGCCAGCA TCCGGGGCGT GAAGATCACC AAGCAGCCCC AGTACCTGCG CCACTTCACT TGCGAATGTG ACTGGGTTTG A
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Protein sequence | MPKTLIEPFR IKSVEPIRMT TRPERERLLA AAKLNVFKLR AEDVLIDWLT DSGTGAMSSK QWGAIMEGDE SYAGARSFYR LEAVIQGITG MQHFVPTHQG RAAEKVLFTA VCKKGDLVPN NSHFDTTRAN LEYLGVEAVD LVIPEGLQPA LLYPFKGNID LARVEALLKT EGDRIPFGMI TVTNNTGGGQ PVSMANIRAY AKLLKAYGKP LIMDVCRFSE NAMFIKMREP GYENTPIKQI VQEMFSYADG ATMSAKKDGM VNIGGFIVLR SEEWMDAVRN VLIMTEGFPT YGGLAGRDLE ALAVGLEEGM QEDYLRYRLR TAEYLGERLE ASGVGFVKPT GGHAVYIDAK TVLPNMPIQH YPAWALCNAL YLEGGIRGVE IGSVMFGKRL LDGSETYHSM ELVRLAFPRR MYTQSHFDYA AEVIDEVKQK AASIRGVKIT KQPQYLRHFT CECDWV
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