Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2426 |
Symbol | |
ID | 3961038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2675605 |
End bp | 2676420 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637917244 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_523674 |
Protein GI | 89901203 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.464863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACGG GAAGAATTGC CACGTGGATG GATCAGGCAC AACCCATTCT GGTGGCCTTT GGCCTGAAGG TCGTCGGCGC CATTGCGGTC TTTGTCGTGG GTCGCTGGTT GATCAGCTTG GTGACGAAGC TGGTGGGTGC CGCCATGACC CGGCAACAGC TGGACCCCAC GGTGCAGCGC TATCTTGTCA GCTTCATCAC GGTCGCGCTG AACATCATCC TGGTGGTCGC CATCCTGGGT TATTTCGGTG TTGAGACGAC TTCGTTTGCC GCCTTGGTGG CTGGTGCCGG CGTGGCCATT GGTGCGGCGT GGAGCGGATT GCTCGGCAAT TTTGCGGCGG GCATCTTCCT GCTGGTGCTA CGCCCCTATC AGGTCGCTGA CTACGTGATG ATTGGTGGCA TCGAGGGTAC GGTGCTGGAA CTGGGTCTGT TCGGCACGAC GCTCACCACT CCCGACAACG TCAAGACCCT CGTCGGCAAT GGCAAGATCA TGGGCAGTGA CATCAAAAAC TACTCCGCCA ATCCTTATCG TCGGGTCGAA CTGGTGGCGC AACTCGCGGG CAGCGCCGAT CTTCACAAGG CGATTGCTCT GTTGAAACAG GAGGTGTCGA AGGTGGCCAA TATCAACACG ACCCCACCGG TCGACGTCGA GATCCTGGAA TTCAACGAGT TTGGCCCCAA GCTCGCGGTG CGGCCCCATT GCCATACCGA ACACTACTGG CAAGTCTATT TCGATACCAA CAAGACGATT GCGGATACCC TGGGCGCTGC GGGCTTCCCG GTCGCAACCC GCCCAGTCAA GGTCTACCCG ATTTGA
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Protein sequence | MDTGRIATWM DQAQPILVAF GLKVVGAIAV FVVGRWLISL VTKLVGAAMT RQQLDPTVQR YLVSFITVAL NIILVVAILG YFGVETTSFA ALVAGAGVAI GAAWSGLLGN FAAGIFLLVL RPYQVADYVM IGGIEGTVLE LGLFGTTLTT PDNVKTLVGN GKIMGSDIKN YSANPYRRVE LVAQLAGSAD LHKAIALLKQ EVSKVANINT TPPVDVEILE FNEFGPKLAV RPHCHTEHYW QVYFDTNKTI ADTLGAAGFP VATRPVKVYP I
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