Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2394 |
Symbol | |
ID | 3962064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2638030 |
End bp | 2638797 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637917212 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_523642 |
Protein GI | 89901171 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0405792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAACT TGTCACGTAC GCGACAAGTT GTCATTGAGC TGACAATTGA TCTGTGTTTA CCCTTGCCCA TGTTTCCCAG CACCGCCTCA TCAACTTCAC GCTTTCTTGC CACGCAATCC TGGTTCGCCG GCTTGCCGCG TTTGACTCAA ATGCGGGTCG ATGAAAGCCT CTTGCGCACG AGCGGAAGAC GTGGCGATGT GATGCTGCAG GCCAATGCGA AGGTAGAGGG CTGCTACGCG GTTCTGTCGG GCCTGATCAA GGTACAGACC GTTCCTGTGA AGGGGCGGTC ATCCAGTTTT TTGGGTGTGG CGTGCGGCGA ATGGTTTGGG GAAGGCTCCG CACTGAAGAC CGAGCCGCGC AGGTATGAAG TCATTGCGTT GCGCGATACC GAGTTGTTGT GCCTGCCGCT GGCCGAATTT GACCACCTGC GCGCGACCAG CATTGAGTTC AACCAGTTTC TGGTGAGCCA GCTAAATCTT AGGGTGAGTC AGGCCATGGC GCTCATCGAA GCCAGCCGTC TGCGCACACC CGAGCAGCGT GTCGCGCTGT CCCTGAGCCG CCAGTTCTGG AGCCGGACCC GCAAACTTGG CCTGTCACAA GACGAACTGG CCAATCTGGT CGGGGTATCG CGTCAGACCG CCAACCGGGC TTTGCAGGCA TTGGCACAAC GTGGGCTGGT GACACTTGAA TTCGGGCGCG TGGATATTGT CGACGACGAC GCACTGACGC GCTTCATCTT TTCAGCACCC GAAAATCCGT CGGATTGA
|
Protein sequence | MQNLSRTRQV VIELTIDLCL PLPMFPSTAS STSRFLATQS WFAGLPRLTQ MRVDESLLRT SGRRGDVMLQ ANAKVEGCYA VLSGLIKVQT VPVKGRSSSF LGVACGEWFG EGSALKTEPR RYEVIALRDT ELLCLPLAEF DHLRATSIEF NQFLVSQLNL RVSQAMALIE ASRLRTPEQR VALSLSRQFW SRTRKLGLSQ DELANLVGVS RQTANRALQA LAQRGLVTLE FGRVDIVDDD ALTRFIFSAP ENPSD
|
| |