| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1841 |
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| Symbol | |
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| ID | 3963016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1979634 |
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| End bp | 1980131 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637916661 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_523098 |
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| Protein GI | 89900627 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00146422 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCGC GCAGTTTGAA TTGGATCAAC CTGCAAGTGC TGCGCCTGTC CATGGCGGCT
CTGGTACTGA CGTCAGCCGT CTTGACTTAT TCGGTGGCGA CGCGCTACTT TTTTAAAACT
GCCACCGACT GGCAAGACGA AGCCTCGGTT TTCATGCTGG TCGGTGCCAT CTTCATGTGC
ACTGCCTACG TGCAATCGAT GCGGGGGCAT GTCGGCATCG AAGCCTTGGC AACACTCTTG
CCCGCCAGCG TGAACCGGGT GCGCGCCACA GTGGTGGACA TTGTCTCGAC CTTGTTTTGC
AGCTTTTTTG CCTGGAAGTC ATGGACGCTT TTCCATGAGG CTTGGGCAGA AGGGCAAACC
ACATCGAGCA GCTTCGCACC GCCGCTATGG ATTCCCTACA GTCTGATGGC CGTGGGTATG
AGCTTGCTGG CGCTGCAGCT GTTACTCCAG TCAGTCTTGC ATGTCGCCGG TGGTGATGGT
GAAGGGGATG CCAAGTGA
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| Protein sequence | MLARSLNWIN LQVLRLSMAA LVLTSAVLTY SVATRYFFKT ATDWQDEASV FMLVGAIFMC
TAYVQSMRGH VGIEALATLL PASVNRVRAT VVDIVSTLFC SFFAWKSWTL FHEAWAEGQT
TSSSFAPPLW IPYSLMAVGM SLLALQLLLQ SVLHVAGGDG EGDAK
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