| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1715 |
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| Symbol | hemC |
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| ID | 3962513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1851358 |
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| End bp | 1852305 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637916538 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_522975 |
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| Protein GI | 89900504 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTT TGACAATCGC CACACGAGAA AGCCGCCTGG CCCTGTGGCA GGCCGAATAT
GTCCAGGACC TGCTGACGCG GCGCGGTCAC CAGGTTGGTC TTTTGGGCAT GACAACCCTG
GGTGACCAGA TTCTGGACCG CGCTTTGAGC AAGGTCGGTG GCAAGGGCCT GTTTGTCAAG
GAACTGGAGG TTGCGCTGGA GGATGGCCGG GCTGATCTGG CCGTGCATTC ACTCAAAGAC
GTGCCGATGG AGCTGCCCGA CGGCTTTGCG CTGGCCTGCG TGATGGAACG TGAAGACCCG
CGCGACGCGT TTGTGTCGAA TCAATATGCC AATCTGGCCA GCCTGCCGCA AGGCGCTGTG
GTCGGCACCT CAAGCCTGCG CCGGATGGCC TTGTTGCGCG CCCTGCGTCC GGACCTCAAG
ATCGAGCCCT TGCGGGGCAA CCTGGACACC CGGTTGCGCA AGCTCGATGA CGGTATGTAT
GCGGCCATTG TGCTGGCGGC AGCCGGTTTG AAGCGGCTCG GTCTGAGCCA GCGCATCCGC
GCCACTTTTG AGCCCACCGA TATGTTGCCC GCTGCCGGGC AGGGTGCGCT CGGCATCGAG
GTGCGTAGCC AGCGTCAGGA TGTGATTGAT GCCTTGGCGC CATTGGCGCA CCACACCACT
TGGCTGGCGG TTTCGGCTGA GCGCGCAGTG AGCCGGGCCA TGGGCGGGAG TTGTTCCATG
CCGCTGGCCG CGTATGCCAC CCTGGCCGCC GATATTTTGA CGATCGATGC CGCCTGGGGC
GACCCGGATG GCAAGCTGGC CTTGGTGCAT GTGCGCGCCA GTGCGGCGGT GTCCGATCTC
GCCAGTGCCA CAGCATTGGG CGCTCGGGTG GCGGCAGATT TGCGCGCGGC CGTGCTGGCC
AATGGCGGCA CACTGCTGGT GGCGGACGCG CCGCAGGGCC AGGCCTGA
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| Protein sequence | MSTLTIATRE SRLALWQAEY VQDLLTRRGH QVGLLGMTTL GDQILDRALS KVGGKGLFVK
ELEVALEDGR ADLAVHSLKD VPMELPDGFA LACVMEREDP RDAFVSNQYA NLASLPQGAV
VGTSSLRRMA LLRALRPDLK IEPLRGNLDT RLRKLDDGMY AAIVLAAAGL KRLGLSQRIR
ATFEPTDMLP AAGQGALGIE VRSQRQDVID ALAPLAHHTT WLAVSAERAV SRAMGGSCSM
PLAAYATLAA DILTIDAAWG DPDGKLALVH VRASAAVSDL ASATALGARV AADLRAAVLA
NGGTLLVADA PQGQA
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