| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1712 |
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| Symbol | |
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| ID | 3962510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1844191 |
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| End bp | 1844931 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916535 |
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| Product | LytR/AlgR family transcriptional regulator |
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| Protein accession | YP_522972 |
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| Protein GI | 89900501 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.42147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCTGA AGGTATTGAT CGTGGACGAT GAAGCCCTGG CGCGCGCCCG CCTGCGAACG
CTGCTGGGGG ATTGCAACGC GCCTGCGGCC AGTGTTGAGG CCGAGGCCGC CAACGCCGCG
CAGGCCTTGG CGTGGCTGCA GCACCACCCG GTCGATGTGG CCTTGATCGA TATTCACATG
CCGGGTTCCG ACGGCTTGAG GCTGGCGCAG ACGCTGCGCA CGCTGCCCCA GCCGCCGGCG
GTGGTGTTTG TTACCGCCTA CGCTGAACAC GCCGTGCAGG CGTTCGAGGT CGAAGCGGCG
GACTATCTGA CCAAGCCGGT CCGGCTGGAG CGGCTGCAGC TTGCGCTACA AAAAATAGAG
CGAAATAGGC AGAATGGACG GGGGCCGCAG CCCGATTTTC CTGGGGAAGT GTTGATTATT
CAAGACCGTG GCCGGACCGA GCGTGTACCG CTGGCCGAGG TGTTGTACCT CAAGGCGGAG
CTGAAATACA TCACGGTCCG CACGGCTGCT CGGAGCTATA TTCTGGAGGG CTCCTTGAGT
GAGCTCGAAG ACAAGTACGG GACGCGCTTC CTGCGCATCC ACCGTAATAC CCTGATTGCC
CGGCGCGCTG TGCGCTCGCT GGAGAAGTAC CATGACCCGC AAGAAGGCGA GGGCTGGGCG
GTGCGGCTCA ACGGCATTGA TGAATTGCTG TGGGTGTCGC GCCGGCAATT GGCGGCGGTG
CGGGAGCTGG TCGCAAGTTA G
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| Protein sequence | MALKVLIVDD EALARARLRT LLGDCNAPAA SVEAEAANAA QALAWLQHHP VDVALIDIHM
PGSDGLRLAQ TLRTLPQPPA VVFVTAYAEH AVQAFEVEAA DYLTKPVRLE RLQLALQKIE
RNRQNGRGPQ PDFPGEVLII QDRGRTERVP LAEVLYLKAE LKYITVRTAA RSYILEGSLS
ELEDKYGTRF LRIHRNTLIA RRAVRSLEKY HDPQEGEGWA VRLNGIDELL WVSRRQLAAV
RELVAS
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