Gene Rfer_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1545 
SymbolhemH 
ID3960534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1661923 
End bp1663032 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content64% 
IMG OID637916364 
Productferrochelatase 
Protein accessionYP_522808 
Protein GI89900337 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTCT TCAAACTCTC CCCCTTCGCC CCCGAGCCCC CGTTCAGGCA CGGCCAGGTG 
CCACGCACCG CCGTGCTGTA CTGCAACCTC GGCACACCCG ACACCCCCAC CACACCTGAT
GTGCGGCGTT TTTTAAGTGA GTTTTTAAGC GACCCGCGCG TGGTTGAAAT CCCGCGCCTG
CTTTGGCTGC TGATCCTGCA CGGCATCATC CTGCGTGTGC GCCCGGCCAA ATCGGCCGCC
AAATACGCCA GCGTCTGGCT GCCCGAAGGC TCGCCACTCA AGGTGTGGAC CGAAAAGCAG
GCCAAGCTGC TGCAAGGCTG GCTGGCCCAG CGCGGCCACC AGGTGCAGGT ACGCTACGCC
ATGCGTTACG GCAGCACGTC GATCGCCGAA CAACTCGATG CGCTCAAGGC CGCCGGTACC
ACCCGCGTGC TGATTCTGCC GGCCTACCCG CAATACTCCG CCACCACCAC GGCCAGCCTG
TTTGACGCGG TCTACGCCTG GGCCGGCCAG GTGCGCGCCA TTCCCGAACT GCGCTTTGTC
AACCATTACC ACGACGACGC CCGCTACATT GCCGCGCTGA CCATGAGCAT TCAGCGTCAC
TGGAAAAGCC ATGGCCGCCC GGATCAACTG GTGATGAGTT TTCACGGTGT GCCCGAACGG
ACCCTGCAAC TGGGCGACCC CTACCACTGC GAGTGCCGCA AAACCGCGCG CCTGCTGGCC
GAACAACTGG GATTGAGCCA AGAGCAGTTC AAGGTCACGT ATCAATCGCG TCTGGGCCGC
GCCAGGTGGT TGCAGCCCTA CACCGAGCCG AGCCTGATCG CCATGGGCAA AGCAGGTGTC
AAACGCGTCG ACGTGGTGTG CCCGGCCTTC ACCAGCGACT GCCTGGAAAC ACTGGAAGAA
ATCAACATGG AAGGCCGCGC CGCCTTCCTG CAGGCCGGCG GCAAAGAGTT TCATTTCATC
CCCTGCCTGA ATGACGACCC CGAGTGGATC ACCGCACTGT GTGACATCAC GCAGCAGCAC
CTGGCGGGCT GGCCAACACA GGCCGCGCCG GATGCGCCCC AGTTGGCAGC GTCACGCGCG
GCGGCGCTGG CCTTGGGCGC CAAGCAGTAG
 
Protein sequence
MSFFKLSPFA PEPPFRHGQV PRTAVLYCNL GTPDTPTTPD VRRFLSEFLS DPRVVEIPRL 
LWLLILHGII LRVRPAKSAA KYASVWLPEG SPLKVWTEKQ AKLLQGWLAQ RGHQVQVRYA
MRYGSTSIAE QLDALKAAGT TRVLILPAYP QYSATTTASL FDAVYAWAGQ VRAIPELRFV
NHYHDDARYI AALTMSIQRH WKSHGRPDQL VMSFHGVPER TLQLGDPYHC ECRKTARLLA
EQLGLSQEQF KVTYQSRLGR ARWLQPYTEP SLIAMGKAGV KRVDVVCPAF TSDCLETLEE
INMEGRAAFL QAGGKEFHFI PCLNDDPEWI TALCDITQQH LAGWPTQAAP DAPQLAASRA
AALALGAKQ