Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0807 |
Symbol | |
ID | 3963971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 844561 |
End bp | 845493 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637915637 |
Product | LysR family transcriptional regulator |
Protein accession | YP_522088 |
Protein GI | 89899617 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGAT TGATGTCAAT GCGGGTTTTC CAAAAAGTCA TCGATGAAGG TGGCTTTGCC GCCGCCGCCA GGGCGCTGGA CATGTCGCCG GCGGTGGTGA CTCGCCTGGT GGCCGATCTG GAAAACCATC TGGGCACACG TTTGCTGCAC CGCAGTACAC GCCGCTTGTC ACTCAGTGTG GCGGGTGAAA CCTATTTGGG CCGGGTGCGC GCCATCCTGC AGGACATTGA TGAGGCCCAT GGCTTGGCCC GTTCCCAGAC GCACGAACTG GAGGGCGTGT TGCGTGTGCT GGCGCCACCC GTGCTTGCAT CGCATGTGCT CGCACCCTTG ATTGCCGGAT TCCGACAGCT TTACCCGAAG ATCTTGCTCA ACATTGAGGT GGCGTCGTTC AAGGAACCCC CGATTGAGGA CTACGACATC ACGCTGATGC CGACCGACGA AGCGTTTGAT GCGGACGTGA TTGCACGCAA GATCTCGTCC ACAGAAGCCG TTCTGGTCGC CTCACCCGCC TACATCGAGC GCAAGGGTGC GCCGGCAACA CCGCAAGACC TGGCGCAGCA TGAAGTCCTG CGCTTGAAGG CGCCAGGGCT GCGTCCACGC ACATGGCGCT TGTTCAATTC GGCACGCCAG GACGAACCTC TGGATGTGGC GGTGGAGCCC GGCCTTTGGA TCAACCATAC CGACACGCTT CTGAGGGCGG CCCTGGACGG GGCCGGAATC ACGTCGGTCG CCGTGGATTT GGTCGCGCCT TACTTGACAC GCGGCGAGCT GGTGCGTGTT TTGCGCCCGT GGATCACCGG CCGGCTCAGT CTGTATGCGG CGCTTCCCAG TCGCAAGTTT TTGCCCGAGC GCACGCGCGT TTTTCTGGAG TATCTGACCG AGCGCACGCG CATTGAAGTC AACAGTGCGG TGCAAGCCTG CCAAAACTGC TGA
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Protein sequence | MDRLMSMRVF QKVIDEGGFA AAARALDMSP AVVTRLVADL ENHLGTRLLH RSTRRLSLSV AGETYLGRVR AILQDIDEAH GLARSQTHEL EGVLRVLAPP VLASHVLAPL IAGFRQLYPK ILLNIEVASF KEPPIEDYDI TLMPTDEAFD ADVIARKISS TEAVLVASPA YIERKGAPAT PQDLAQHEVL RLKAPGLRPR TWRLFNSARQ DEPLDVAVEP GLWINHTDTL LRAALDGAGI TSVAVDLVAP YLTRGELVRV LRPWITGRLS LYAALPSRKF LPERTRVFLE YLTERTRIEV NSAVQACQNC
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