Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0292 |
Symbol | |
ID | 3960315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 294584 |
End bp | 295321 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637915125 |
Product | ABC transporter related |
Protein accession | YP_521578 |
Protein GI | 89899107 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGAAT TGCTCAAGGT CGAGAATTTG AGCGCCGGCT ACGGCGAGGC GGTGGTCTTG CACGGCGTGT CGCTGTCCAT CGCCGAAGGC CAGACGCTGG CGCTGCTGGG GCGCAACGGC ACCGGTAAAA CCACGCTGAT CAACACCCTG GCCGGGGCCA CACGCCAGCA TGGCGGCAGC ATCAGCTTGG GGACTGGCGC AACGTCGGTC ACACTGCACA AGCTGCCCTC CCACGAACGC GCCGCCGCCG GCATTGGCTG GGTGCCGCAA GAGCGCAACA TCTTCAAGTC CCTCACAGTG CATGAGAACC TGACCGCGGT GGCCCGCCCG GCCCGCGCCG GACGGGCCTC ACGCCCCTGG ACTCCCGAGC GTGTCTACGA GCTGTTTCCC CGCCTGGCCG AGCGCAAGAG CAACCTGGGC ACCCAGCTCT CGGGTGGCGA GCAGCAGATG CTGGCCCTGG GCCGTGCGCT GGTGCTCAAC CCCACGCTGC TGCTGCTGGA CGAACCCTGT GAAGGCCTGG CACCGATCAT CGTGCAGGAG CTGCTGCGCG CCATCCGGCG CATCACCCGC GATGAGGGCT TGTCAGCCAT CATCGTCGAG CAGCACCCGC AGGCGATTCT GGCCATCTCG GACACCGCCG CTGTGCTCGA CCGTGGCACC GTGGTGCACA CCGGCACCGC CCGCAGCCTG CAGGAGCAGC CCGCCCTGCT GGACAAGCTG CTGGGTGTGG CACGCTGA
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Protein sequence | MGELLKVENL SAGYGEAVVL HGVSLSIAEG QTLALLGRNG TGKTTLINTL AGATRQHGGS ISLGTGATSV TLHKLPSHER AAAGIGWVPQ ERNIFKSLTV HENLTAVARP ARAGRASRPW TPERVYELFP RLAERKSNLG TQLSGGEQQM LALGRALVLN PTLLLLDEPC EGLAPIIVQE LLRAIRRITR DEGLSAIIVE QHPQAILAIS DTAAVLDRGT VVHTGTARSL QEQPALLDKL LGVAR
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