| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0212 |
|---|
| Symbol | |
|---|
| ID | 3960196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 209419 |
|---|
| End bp | 210432 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637915047 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_521500 |
|---|
| Protein GI | 89899029 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCCT CCAAATTTTT CTTCGTCGCG GCCGCGTTTG TGCTGCTGGC GTTGTGGCCC
CTGATGGCGG GCCAGTACGG TGTGGACCTG GTCACCAAGA TCATGGTGTT TGCCATCTTT
GCACTCAGCC TGGAACTGCT GGTGGGCAGC ACCGGCTTGG TGTGTTTTGG CCAGGCGGCC
TTCTTTGGCA TTGGTGCCTA TGCCACCGTG CTGCTGACAC CGCAGGACGG CGCGCCGTCA
CTGCTGTGGC TGTTGCCTGC TTGTGTGCTG GCGGCGGCCT TGTATGCGCT GCTGGTCGGC
GCGCTGTCGC TGCGCACCAA GGGTGTGTAC TTCATCATGG TCACACTGGC CTTTGCGCAG
ATGGCCTATT ACGTGGTGCA CGACACGCCG CTGGGCGGCG GGACCGACGG CATCTACCTG
ATGGCCAAGC CGGTGGTGCT GGGCACACTG CTGGACCTGG ACAAGCCGAT GGCGTTCTAT
GGCTTTACGC TGGCCTGTCT GACCGCCGTG TTCGGCTTTC TGACCCTGCT GCTGCGCTCG
CGCTTTGGCC GCGCGCTGGC CGGTATTCGC GTCAACGAGC AGCGCATGCG CGCCACCGGT
TTTTCGACCT ACCCGTACAA ACTCGCGGCC TTTGTGATTT CGGGCGGCAT GGCCGGGCTG
GCGGGTTTCT TGTTTGCAGT GAAGGATGGC TTTGTCAACC CCGAGCTGAT CAGCTGGCAT
TTATCCGGCG AGGTGCTGAT CATGATCATC CTGGGCGGCC TGGGGCATTT GCGTGGCGCG
CTGATCGGTG CCTTTGCCTT TGCGCTGTTG CAGGAGTTCT TCAAGTCAGA GGCGATTTTT
GGCGAGTTTG CCAAGCACTG GCATCTGGGT CTGGGCCTGT CCATCATCGC CTGCGTGGCG
CTGCTGCCGC GCGGGCTGGT GGGTGTGCCC GAGCAAGTGA TCACACGCCT GCGTGGCCGC
TCGGGCAGGG TGCGTGATGA TTCGGTTGTG GAAGTGTCCC ATGAGTCCGT CTGA
|
|---|
| Protein sequence | MKSSKFFFVA AAFVLLALWP LMAGQYGVDL VTKIMVFAIF ALSLELLVGS TGLVCFGQAA
FFGIGAYATV LLTPQDGAPS LLWLLPACVL AAALYALLVG ALSLRTKGVY FIMVTLAFAQ
MAYYVVHDTP LGGGTDGIYL MAKPVVLGTL LDLDKPMAFY GFTLACLTAV FGFLTLLLRS
RFGRALAGIR VNEQRMRATG FSTYPYKLAA FVISGGMAGL AGFLFAVKDG FVNPELISWH
LSGEVLIMII LGGLGHLRGA LIGAFAFALL QEFFKSEAIF GEFAKHWHLG LGLSIIACVA
LLPRGLVGVP EQVITRLRGR SGRVRDDSVV EVSHESV
|
|---|
| |