| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0186 |
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| Symbol | |
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| ID | 3961340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 183947 |
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| End bp | 185218 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915021 |
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| Product | major facilitator transporter |
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| Protein accession | YP_521475 |
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| Protein GI | 89899004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.729906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTTG GGTCGGTTAT TTGTTCCAGC GCAGCAAGCG GCTTGAGGGT GCGCGCCTGC
AATGCGGTGA AAATGCAGGT CTCTTTTTAC GGCTCTACCC CCATGAACCG ACACCTCTGG
CTGCTGGCCA TTTGCCAGGG ACTTTTCCTG ACCAACAACG TCACCTTCAT CGCCATCAAT
GGTCTGGTGG GCCTGAGTCT GGCGCCGCTG GGCTGGATGG CAACCCTGCC CGTCATGGGC
TACGTGGTCG GCGGTGCGCT GTCGACCGGC TTGGTGGCCA GGACGCAGCA TCGCTTTGGG
CGCAAAGTGT CGTTTCAGAT GGGCCTGCTG GTGGCACTGG CCTCAAGCCT GCTGTGCGCC
TATGCCGCCG TCAGCCGGAA TTTCTGGTTG TTGTGCTCGG CGACGGTGGT GGCGGGCTAC
TACAACGCCA ACGCCAACCT GTACCGCTTT GCGGCGGCTG AGCTCACGAC CCTCGCCTGG
CGCGAAGAGG CCGTGTCGCT GGTGATGGCC GGGGGACTGA TTGGCGCCGT GCTGGGGCCC
AACCTGGCGG CCCAGACCCG CACGCTCACG AGCGTACCGT TCGCTGGCGC CTACCTGGCG
CTGGCCGGCG TGGCCCTGCT GGCGATGCTC GTGCTGGCCT TCATAAATTT CCCGCCGCCG
CCGGTAAAAA AGTCAACCGG CAGCGGCCGT CCGCTGGGCG AGATCATGCG GCAGCCCGTC
TTCATCGTGG CGGCGGCTGC GGGCGCTTTG AGCTTCGGTG TGATGAACCT GCTGATGGCG
GCCACGCCGC TGGCCATGCA GCAGTGCAGT CTGCCGTTTT CCGACGTGGC GCTGGTGCTG
GAATGGCATG TGATCGGCAT GTTTGCGCCC GGGTTCTTCA CCGGCCATCT GATCAAGCGC
TTCGGCACGC TGACCATCAT GGGGGTTGGC GTGGCGCTCA ATGCGCTGTG TATCCTGGTG
GCGCTGTCCG GCGTCGATCT GCAGCAGTTT TTGATCGCGC TGTTTTTACT CGGCGTGGGC
TGGAATTTTC TGTTCACAGG CAGCACCACC CTGTCCTTGC AAACCTACTC GCCCGAGGAA
AAAGACCGGG CCCAGGGCGC CCTGAATTTC TTTGTCTTCG CCACGCTGGC CGTGAGCTCG
TTGGCCTCCG GCGTGCTGGT CACGACCCGC GGCTGGCAGC TGCTCAATGT CGGCTCCTTG
CTGCCGGTGG CCTGCACGGC TGCGGCGCTG GTGTGGCTCT GGCTGCGGCA AGTGCGGGCG
CGGGTGGCTT AG
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| Protein sequence | MSVGSVICSS AASGLRVRAC NAVKMQVSFY GSTPMNRHLW LLAICQGLFL TNNVTFIAIN
GLVGLSLAPL GWMATLPVMG YVVGGALSTG LVARTQHRFG RKVSFQMGLL VALASSLLCA
YAAVSRNFWL LCSATVVAGY YNANANLYRF AAAELTTLAW REEAVSLVMA GGLIGAVLGP
NLAAQTRTLT SVPFAGAYLA LAGVALLAML VLAFINFPPP PVKKSTGSGR PLGEIMRQPV
FIVAAAAGAL SFGVMNLLMA ATPLAMQQCS LPFSDVALVL EWHVIGMFAP GFFTGHLIKR
FGTLTIMGVG VALNALCILV ALSGVDLQQF LIALFLLGVG WNFLFTGSTT LSLQTYSPEE
KDRAQGALNF FVFATLAVSS LASGVLVTTR GWQLLNVGSL LPVACTAAAL VWLWLRQVRA
RVA
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