| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0162 |
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| Symbol | |
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| ID | 3960164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 162015 |
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| End bp | 162677 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637914998 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_521452 |
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| Protein GI | 89898981 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.269477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGAAT TCAACTTTGG CACCGTGCTG GCACAGTGGC CCATGCTCTT GCGCGGGTTG
GGCCTGACGG TGACGCTGAC CGCCTTCTCG GCGCTGCTGG GCACGCTGGC GGGCACGGCC
TGTGCCTGGG CGCGTCTGCA TGGCGGCCCG ATGCTGAAAC GGGTGGTGGG TGCCTACGTG
GAACTGGTGC GCAACACGCC GTTCATCATC CAGCTGTTCT TCATCTTCTT TGGCCTGCCT
TCGCTGGGGC TGCGGCTGTC GGTGGAAATG GCGAGCGTGC TGGCCATGGT GTTGAACCTG
GGGGCCTATG CGTGCGAGAT CGTGCGCGCC GGTTTGCAGA CCACCCCCAG GGGCCAGTTG
GAAGCGGCCA TGAGCCTGGC GCTGACCCCG TGGCAAACCT TCTCGCGCGT GGTGTTGCCG
CCAGCATTGG CGCGTATCTG GCCGGCGCTG GTGAGCCAGA TCATCATCGT CATGTTGGGC
TCGGCGGTGT GCGGGCAAAT CTCGGCGGAA GAACTCTCGC AGGCGGCGAA CCTGATTTCC
AGCCGCACTT TCCGCAGTTT TGAGTCCTAC ATCATCGTGA CCGGCATCTA TCTGCTGCTG
GCCATTGCGC TGCGGCAGTT GCTGTACTGG GTCGGTCCGC GCTTCATCTT TTCCAGCCGT
TAA
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| Protein sequence | MIEFNFGTVL AQWPMLLRGL GLTVTLTAFS ALLGTLAGTA CAWARLHGGP MLKRVVGAYV
ELVRNTPFII QLFFIFFGLP SLGLRLSVEM ASVLAMVLNL GAYACEIVRA GLQTTPRGQL
EAAMSLALTP WQTFSRVVLP PALARIWPAL VSQIIIVMLG SAVCGQISAE ELSQAANLIS
SRTFRSFESY IIVTGIYLLL AIALRQLLYW VGPRFIFSSR
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