| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4429 |
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| Symbol | |
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| ID | 5541942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5697498 |
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| End bp | 5698790 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896527 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001434463 |
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| Protein GI | 156744334 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATGCC GTCTGGTTGC CATTCTACTG GTTGCTGCGC TGCTCGCCGC ATGTGAGTCG
GGCAGCACGC CCGAAACCTC TTCCGCTCCG ACGACTGTTG CACAAGATTC CAGCGTTGGA
CCACTCCTCC TCTGGCATGG ATGGTCGGGC GGTGATCGGC AGGCGCTGGG GCGCCTGGTG
GATCGCTATA ACCGTCAGCA GCGCGACGGG CGTATTGTGC TGCAATCAGT GCCGCTGGCA
GGCTTCGCCG CCGAACTGCG CGCAGCCGTG GCAGCAGGCA GTGGTCCTCA TCTGATTCTG
ATTCCAAATA CCTGGATCGG TGGGCTGGCG GAGGCGGGGG TGTTGCTGCC GCTCAACGAT
CTGGTGCCGG CGCAGGAGAC CGGTACGCTT CTGCCGGTGA CGCTGGCGGG AGCGCAGGCG
CGCGATGCCG CCGGAACACT GCGGTTGTAC GGTGCACCGG TACGCTTCGA TACGCTGGCG
CTCTACTACA ATGCTGCCAA TCTCACCGAG CCCCCCGCCG ATACCGCAAC CATGCTCGCT
GTTGGACGCG GCTTGAGCGA CCCGGAAGCC CAACCACCGA TCTGGGGACT GGCGCTCAAC
CTGTCGTATG ACAATATGAT CGGGTATCTC TACGCCTTTG ACGGGCGGAT ATTCGATGAC
AACGGGCAGG TTGCGCTCGG TACAGCCGGT CGTGCTGGCG CAGAACAATG GCTCGCCTGG
TTGATCGCGC TGCAAAATGA TCCGCGCATT CTGGCGCGGA GCGAGAGTAG CATCCTGGTC
GATCGTGAAT TGAAAGATGG GCGCGCCTTT ATGACGTTTG ATTGGGCGCA TCAGATCGGT
GTCTATCGTG GTCTGTGGGG CAATCAGATC GGCATTGCGC CGTTGCCACG TCTGAGTGAA
ACGGGACGGG CGCCACGTCC ATATGTGCGC GCAGATGTCC TGGCGATCAA TAATCTTGCC
GGGGTACGTG AGCGCGAGGC GGCTGCACGG TTTATCCGTT TCATGATCAG CGAAGAAGCG
CAGGCTGTTC TGCTGCAAAG TGATATGCAA CCGGCATCGC GCACACTGGC GCTGACCGGC
GATTCGCCAC AGGAGATCGC CGCACAGGTG TTTCGCGTCC AGGCGGAACA GGGGCTTCCC
ATGCCCAACT CGAGTGTGCG CGCCTTTGTG GAGCAGGAAA TCAAACGCAT GCAACGCCAG
GCGTCGCTCG GTCTCACCAC ACCATCCGAT GCAGTTACTG AGGCCGACCG CCGGCTGCGC
GAACGATTGG AACCTTCTGC GCCAATGCCT TAA
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| Protein sequence | MRCRLVAILL VAALLAACES GSTPETSSAP TTVAQDSSVG PLLLWHGWSG GDRQALGRLV
DRYNRQQRDG RIVLQSVPLA GFAAELRAAV AAGSGPHLIL IPNTWIGGLA EAGVLLPLND
LVPAQETGTL LPVTLAGAQA RDAAGTLRLY GAPVRFDTLA LYYNAANLTE PPADTATMLA
VGRGLSDPEA QPPIWGLALN LSYDNMIGYL YAFDGRIFDD NGQVALGTAG RAGAEQWLAW
LIALQNDPRI LARSESSILV DRELKDGRAF MTFDWAHQIG VYRGLWGNQI GIAPLPRLSE
TGRAPRPYVR ADVLAINNLA GVREREAAAR FIRFMISEEA QAVLLQSDMQ PASRTLALTG
DSPQEIAAQV FRVQAEQGLP MPNSSVRAFV EQEIKRMQRQ ASLGLTTPSD AVTEADRRLR
ERLEPSAPMP
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