Gene Rcas_4145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4145 
Symbol 
ID5541656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5367188 
End bp5367586 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content57% 
IMG OID640896256 
Producthypothetical protein 
Protein accessionYP_001434194 
Protein GI156744065 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0363435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCGGT TGTGCGTCCA ACGCCCCCGG ACGTGGGAGG ATTTTCTTGC GGAGCGCGAT 
GAAGACAACC ACGCCGAGTG GGTGGATGGG CAGGTCATTC TGATGTCCCT GGCGAGCAGC
GATCATCAAC TGCTCAAGGT TTTCCCGGTG CGGGTGCTGG AACACTATCT GGAACGGCAT
CCACAGGGGT TGATTCTGGA TGTGCCTTTC CTGATGCGAT TGCCCACACG TCCAAGCGGG
CGAGAGCCAG ATATTCTCTT CATTGCTCAA GAATGCGTGG GTCTGCTTCA GCCATCGTTC
CTCGATGGCG CGGCGGATCT GGTGGTGGAA ATTATCTCCC CAGAGAGTGA CGAGCGCGAC
CGTGGCGAGA AGTTCATTGA ACTGTTCTGG GCATTCTGA
 
Protein sequence
MNRLCVQRPR TWEDFLAERD EDNHAEWVDG QVILMSLASS DHQLLKVFPV RVLEHYLERH 
PQGLILDVPF LMRLPTRPSG REPDILFIAQ ECVGLLQPSF LDGAADLVVE IISPESDERD
RGEKFIELFW AF