4 homologs were found in PanDaTox collection
for query gene Rcas_4141 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3365  polysaccharide deacetylase  78.68 
 
 
619 aa  1013    Roseiflexus sp. RS-1  Bacteria  normal  normal  0.249187 
 
 
-
 
NC_009767  Rcas_4141  polysaccharide deacetylase  100 
 
 
621 aa  1255    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.666658  normal  0.0171825 
 
 
-
 
NC_011831  Cagg_2755  polysaccharide deacetylase  49.12 
 
 
649 aa  528  1e-148  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3131  polysaccharide deacetylase  37.15 
 
 
596 aa  335  1e-90  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.927219  n/a   
 
 
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