Gene Cagg_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2755 
Symbol 
ID7269825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3379025 
End bp3380974 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content58% 
IMG OID643567576 
Productpolysaccharide deacetylase 
Protein accessionYP_002464054 
Protein GI219849621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACAAT GCAGCCGCGT GGTAGATGGC TACCGGCAAC AATACCATAC GACAGTTGAT 
CGCATGATTT CACGCCCGTT TGCATTCGGC GCCATCATCT TCTCGTTCAT TATTGGTGCA
GTTGGTGTCT TCCTCTTCAT CAGTCAGCGG CTCGACCGTT GTACTGCACT ACCATTGTTC
GATCCCAATC TGTTACCAAA TGCGCAGTTT GCCATTCCCG GCGAGGTAAG TGGCCTCCCT
GCCGGCTGGA GTCGTGGCGC CGGCGGGGTT GAAGTGCATG GTCCGGCGGT TGATGGACAG
GGCTTTGATC TTGATGGCGA TGGGCGTGGT CTGCAATTGA TCGGTATCGC CAACTATGCG
CAAACACCAC CGATAACGGT AGAACCGGGT GTAACCTACT GTTTCACCGT CGCTGCGCTC
ACCGATTCGG TGTTGCGTTC GGCTACACGT GCGCGGCTCG TATTTGAGTG GTATGACCAG
CGCGGGGAGC TGTTCCAGCA GGCAGTGACC GCGTGGCAAC CCGTTGTTCT GTGGACACCC
GACCGACCAC CGGCGAGTTG GTCGACGATC GGGGGGGCTG TCCGGGCACC GGAACCGGCA
CGTGTCCTGC GAGTGCGGAT CGAGCCGTCG TCCGACGATC GCATCTACCT CGATATGCCA
CGACTGCAAC GTGGTGGGGC GTCATTGCCA ATCGCCGAAT CGTCCGAATC GACATCACCG
CTCAAGATTG CGCCCTGGCC GGAAGGGTAT CAGGCTGCCG TGGCCTTCAC CTTCGATTGG
GAGACGGCAA TGGGTGGGCT GGTCCATTCG CGGTCGGTTG ATGATCCGCG CGCCGATGAA
GACCCGGTGA TGCGGGGGAT GCGCATGCGT ACCGGCGTAG AAACGAGCAT GGCCATCTTT
GCCCGTCATA ACGTGCGCGC AACGTACTAT GCAACCGGGT ACAATTTTCT GATGGGGAAC
CGGGAGCAAC GTCGGTTTAT GGGCGATCCG GTTTTTACGT GGGCGTCGGC GGCCAACGGT
TGGCGGAGCG ATCGATGGGT GACGCATCGG TGGTTTGGTG ATGATCCTTA CGGCACCGTT
GCTACCGACC CGGCGTGGTA TTTTGGCGAT CAGATTGAGC CGTTGTTGGC TGCCGGGCAC
GAAATCCAGA GTCATACGTT CAGCCATTTA TACGGTGGTT ATGCGGACGC CGCCACGTGG
CGGGCCGATC TCGAAGCATG GAATACGGTT GCTGCCGAAC GCGGTGTTGG CAATGCGCGC
TCGTTGGCCT TCCCGTGGAG TAGTAGTGCC GGGATGAGCG ATGCCAATTG GGATGTTATC
GAGCAACTCG GGATTCGCTC GGTCACCCGC CTCAGCGACT ATGGCCCCTA CAACCTCTTT
CCTACCGATG AACAGGGTCT GATTCGCAAT CCGCAGTGCC GTTGGCTGCC CGGACGGGAA
GGCCGTATTC TGGCCTGCCC CGACTTTTAT CTCACGCCGA ACCGGGCCGA TTTGGCAATT
GCCCAGATCG AGTGGGCCGT CGCTGTCGGT GGCATGATCG ATATCTGGGC GCATACCGAG
GAAGTGACGA GTGTCGCTCA ACAAACCGCG TGGGAAGATG TGGTATCCTA TACCGTCAGG
CGTGGCGATG TCTGGGTCGC ACCGCTGAGT GAGATCGCTC ATTGGCAGAT TGCGCGAATG
TCGCTGGCGA TCACTCCGGT CGCCACATCC TCAGATACCT TCAGGTCTGG TAATAGTGAT
CCGGCACAGC GGTATCGCCT ATCAAATCCA TCGCCTTACG AATTGGTAGG ACTGATGATC
GATCTGCCTT CAGATACTGC TGCTGTAGCC ATCGATCACA ATATCATACC GCGTACACAG
TGGCAAGCGC GAGGTTGGTT ACGGATCGAT CTGGTAGCCG GTCAGACAGT TGAGGTGACA
ATGTGGCCAA CACGATCAAA CAGCCGCTAA
 
Protein sequence
MVQCSRVVDG YRQQYHTTVD RMISRPFAFG AIIFSFIIGA VGVFLFISQR LDRCTALPLF 
DPNLLPNAQF AIPGEVSGLP AGWSRGAGGV EVHGPAVDGQ GFDLDGDGRG LQLIGIANYA
QTPPITVEPG VTYCFTVAAL TDSVLRSATR ARLVFEWYDQ RGELFQQAVT AWQPVVLWTP
DRPPASWSTI GGAVRAPEPA RVLRVRIEPS SDDRIYLDMP RLQRGGASLP IAESSESTSP
LKIAPWPEGY QAAVAFTFDW ETAMGGLVHS RSVDDPRADE DPVMRGMRMR TGVETSMAIF
ARHNVRATYY ATGYNFLMGN REQRRFMGDP VFTWASAANG WRSDRWVTHR WFGDDPYGTV
ATDPAWYFGD QIEPLLAAGH EIQSHTFSHL YGGYADAATW RADLEAWNTV AAERGVGNAR
SLAFPWSSSA GMSDANWDVI EQLGIRSVTR LSDYGPYNLF PTDEQGLIRN PQCRWLPGRE
GRILACPDFY LTPNRADLAI AQIEWAVAVG GMIDIWAHTE EVTSVAQQTA WEDVVSYTVR
RGDVWVAPLS EIAHWQIARM SLAITPVATS SDTFRSGNSD PAQRYRLSNP SPYELVGLMI
DLPSDTAAVA IDHNIIPRTQ WQARGWLRID LVAGQTVEVT MWPTRSNSR