Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2755 |
Symbol | |
ID | 7269825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3379025 |
End bp | 3380974 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643567576 |
Product | polysaccharide deacetylase |
Protein accession | YP_002464054 |
Protein GI | 219849621 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTACAAT GCAGCCGCGT GGTAGATGGC TACCGGCAAC AATACCATAC GACAGTTGAT CGCATGATTT CACGCCCGTT TGCATTCGGC GCCATCATCT TCTCGTTCAT TATTGGTGCA GTTGGTGTCT TCCTCTTCAT CAGTCAGCGG CTCGACCGTT GTACTGCACT ACCATTGTTC GATCCCAATC TGTTACCAAA TGCGCAGTTT GCCATTCCCG GCGAGGTAAG TGGCCTCCCT GCCGGCTGGA GTCGTGGCGC CGGCGGGGTT GAAGTGCATG GTCCGGCGGT TGATGGACAG GGCTTTGATC TTGATGGCGA TGGGCGTGGT CTGCAATTGA TCGGTATCGC CAACTATGCG CAAACACCAC CGATAACGGT AGAACCGGGT GTAACCTACT GTTTCACCGT CGCTGCGCTC ACCGATTCGG TGTTGCGTTC GGCTACACGT GCGCGGCTCG TATTTGAGTG GTATGACCAG CGCGGGGAGC TGTTCCAGCA GGCAGTGACC GCGTGGCAAC CCGTTGTTCT GTGGACACCC GACCGACCAC CGGCGAGTTG GTCGACGATC GGGGGGGCTG TCCGGGCACC GGAACCGGCA CGTGTCCTGC GAGTGCGGAT CGAGCCGTCG TCCGACGATC GCATCTACCT CGATATGCCA CGACTGCAAC GTGGTGGGGC GTCATTGCCA ATCGCCGAAT CGTCCGAATC GACATCACCG CTCAAGATTG CGCCCTGGCC GGAAGGGTAT CAGGCTGCCG TGGCCTTCAC CTTCGATTGG GAGACGGCAA TGGGTGGGCT GGTCCATTCG CGGTCGGTTG ATGATCCGCG CGCCGATGAA GACCCGGTGA TGCGGGGGAT GCGCATGCGT ACCGGCGTAG AAACGAGCAT GGCCATCTTT GCCCGTCATA ACGTGCGCGC AACGTACTAT GCAACCGGGT ACAATTTTCT GATGGGGAAC CGGGAGCAAC GTCGGTTTAT GGGCGATCCG GTTTTTACGT GGGCGTCGGC GGCCAACGGT TGGCGGAGCG ATCGATGGGT GACGCATCGG TGGTTTGGTG ATGATCCTTA CGGCACCGTT GCTACCGACC CGGCGTGGTA TTTTGGCGAT CAGATTGAGC CGTTGTTGGC TGCCGGGCAC GAAATCCAGA GTCATACGTT CAGCCATTTA TACGGTGGTT ATGCGGACGC CGCCACGTGG CGGGCCGATC TCGAAGCATG GAATACGGTT GCTGCCGAAC GCGGTGTTGG CAATGCGCGC TCGTTGGCCT TCCCGTGGAG TAGTAGTGCC GGGATGAGCG ATGCCAATTG GGATGTTATC GAGCAACTCG GGATTCGCTC GGTCACCCGC CTCAGCGACT ATGGCCCCTA CAACCTCTTT CCTACCGATG AACAGGGTCT GATTCGCAAT CCGCAGTGCC GTTGGCTGCC CGGACGGGAA GGCCGTATTC TGGCCTGCCC CGACTTTTAT CTCACGCCGA ACCGGGCCGA TTTGGCAATT GCCCAGATCG AGTGGGCCGT CGCTGTCGGT GGCATGATCG ATATCTGGGC GCATACCGAG GAAGTGACGA GTGTCGCTCA ACAAACCGCG TGGGAAGATG TGGTATCCTA TACCGTCAGG CGTGGCGATG TCTGGGTCGC ACCGCTGAGT GAGATCGCTC ATTGGCAGAT TGCGCGAATG TCGCTGGCGA TCACTCCGGT CGCCACATCC TCAGATACCT TCAGGTCTGG TAATAGTGAT CCGGCACAGC GGTATCGCCT ATCAAATCCA TCGCCTTACG AATTGGTAGG ACTGATGATC GATCTGCCTT CAGATACTGC TGCTGTAGCC ATCGATCACA ATATCATACC GCGTACACAG TGGCAAGCGC GAGGTTGGTT ACGGATCGAT CTGGTAGCCG GTCAGACAGT TGAGGTGACA ATGTGGCCAA CACGATCAAA CAGCCGCTAA
|
Protein sequence | MVQCSRVVDG YRQQYHTTVD RMISRPFAFG AIIFSFIIGA VGVFLFISQR LDRCTALPLF DPNLLPNAQF AIPGEVSGLP AGWSRGAGGV EVHGPAVDGQ GFDLDGDGRG LQLIGIANYA QTPPITVEPG VTYCFTVAAL TDSVLRSATR ARLVFEWYDQ RGELFQQAVT AWQPVVLWTP DRPPASWSTI GGAVRAPEPA RVLRVRIEPS SDDRIYLDMP RLQRGGASLP IAESSESTSP LKIAPWPEGY QAAVAFTFDW ETAMGGLVHS RSVDDPRADE DPVMRGMRMR TGVETSMAIF ARHNVRATYY ATGYNFLMGN REQRRFMGDP VFTWASAANG WRSDRWVTHR WFGDDPYGTV ATDPAWYFGD QIEPLLAAGH EIQSHTFSHL YGGYADAATW RADLEAWNTV AAERGVGNAR SLAFPWSSSA GMSDANWDVI EQLGIRSVTR LSDYGPYNLF PTDEQGLIRN PQCRWLPGRE GRILACPDFY LTPNRADLAI AQIEWAVAVG GMIDIWAHTE EVTSVAQQTA WEDVVSYTVR RGDVWVAPLS EIAHWQIARM SLAITPVATS SDTFRSGNSD PAQRYRLSNP SPYELVGLMI DLPSDTAAVA IDHNIIPRTQ WQARGWLRID LVAGQTVEVT MWPTRSNSR
|
| |