| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4131 |
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| Symbol | |
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| ID | 5541642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5346011 |
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| End bp | 5348044 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896243 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001434181 |
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| Protein GI | 156744052 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00103927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000820148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAACGCA CACTTGTCGC GCTGTTCCTT ATCGCACTGG CGCCGCGCAT TTGGGCGCTC
AATTGGGGAT TGCCCTATGT TGAACATCCC GACGAGCCCG CCCTGGTCGA AACAGTGGTG
CGTATGGTGC AGGAGGGCGA CTGGAATCCG CGACGATTCG TGTATCCATC GCTCTCTTTC
TACTTGCTGG CGGGCGTCGT CTTTCTCCAT GCGCAATGGG GCATAGCAAC CGGCATCTAT
GCATCGATCG CCGATCTGCC GCTCAAGACA TATCTCTTCA CTCTGGCGCC AGATCTGTAC
ATCTGGTTGC GCGCGCTGAT CGCGATCCTG GGGGCAGCGA CCGTTCCCCT CATCTACATA
CTGGCGCGGC GAATGTTCGA TGCACCTTCA GCATACCTCG CAGCGCTGAC ACTCAGTGTT
GCGGAATACC ACGTGCAACA TGCGCACTTT ATCACCACCG ATGCGCCAAC CGGTCTATGG
ACGACGTTGG CGCTGCTGGG CATATGGAAT GTCGCCGAGC GCGGCAGATT GCGCGATTAT
GTGTTGACCG GGATTGCGAC CGGTCTTGCT GCCGGAACGA AATATCAGGC AGGGGTTGTC
GGTCTGGCGC TAGGAGCGGC TGTTGCCGCG CGCCTGATCG ATTCGCGCAC CACAGGCGAA
CTGACACGCT CCGAAGTGAC AGCGCACATC AGAGGCATCG CAGTTGCGGC CGGTCTCGCG
CTCATCGTCT TTGCGCTGAC CACGCCATTC GCAATCCTCG ATATGTCATC GTTCCGCCGG
AGCATTGCCA GCACAATGAC CCAGTACGCC ACGAACGAAG GACAGGGCGA CTTCAGCGGC
GCCTGGCGCC TGGATGGATA TGCACGATTT TTCTGGGAGG ACGGCTTGTT GCCGTCGGGC
GTCCTGCTGA TGGCGGCAGG TTTGCCGTTT CTGGCGCGCT GTGCGCCACG GCAGACGATG
ATTCTGATTG CCGCCATCCT GGTTGGGCTT GCGCCTCTGG CGCCGCAAAC GGTCCATTTT
ATGCGCAACA CGCTGCCGGT CTTTCCGCTG CTTATTCTTC TGGCTTCCGG TGCAACGATC
AGTCTGGGCA GAGCCATCGG GCGATTGCAG TGCCTGAACT CGCAGCCAAT GAAACCGCAA
ACGGTGTCAA ACCGTGTGCT CATGACGCTT CCCATTATCC TGGGAGCGAG CGCGCTGATT
GCGCCGCAGA TTCAAGAAAC CACCTGGCGC CTCTCCTACT GGAGCAGACC GTATACGCTG
GTTCAGGCAG CAGACGTAAT CCGCGCTGAA CCACGAGGAA TGCTCGCGGC TGTTGAAGCA
AATCCCGTTC AGTGGGCGAA CGATCCGGTT GTGCATCCCG TCGACAGCGT CAGCGACCAT
CCTCCAGAGT GGTACTTGTC GCGCGGCTAT CGCTATCTTC TGCTGAACGA GGATCGGCGC
CGCAATCAGG AGAATTACGC CCGTCTGCTG GAAAGCGGCA TGCCATTGTT GGTCATGCCG
CCGCGCGATC TTGGATTGCA GCCGGGTCCT GGCGGAATTG TGCTGGATAT GGGGGAGCGT
ATTGACCTGA TACCGTTCAC GCGGCGCTCT GCACGTTTTG GCGACAGCAT TGATCTGCTT
GGATACGAAC TGCAACCCGG CGATCTCCGG TCGCGCATTA CCCCGCTGGA AGGCGCAAAC
CTTCGTATCT TTGCGCCCGG TCAGTCATTG CAACTTAATC TCTACTGGCG CGCGCTTACT
CGCATGGATC GCAATCTTGT TCTCTTCATC CATATCAACA ATCAGTACGA TCAGCGCGTT
GCTCAACGCG ACCTGCCCCT CCGTCTCGAC GACTATCCAA CGAGTCGCTG GCGCGTGGGC
GAACTCGTCA TTGATCGCGG CGACATGCCA TTGCCACCAC TTCCAGAAGG CGAGTACCGC
CTGCTGATCG GTCTCTATGA CGCTGAAACG GGAGTGCGAT TGCCGGTACG GGATCAAACC
GCAGTGGAAC TGACCACGAT CCGCGTGATC CACACTGCAC CTTCCTCCAA TTGA
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| Protein sequence | MKRTLVALFL IALAPRIWAL NWGLPYVEHP DEPALVETVV RMVQEGDWNP RRFVYPSLSF
YLLAGVVFLH AQWGIATGIY ASIADLPLKT YLFTLAPDLY IWLRALIAIL GAATVPLIYI
LARRMFDAPS AYLAALTLSV AEYHVQHAHF ITTDAPTGLW TTLALLGIWN VAERGRLRDY
VLTGIATGLA AGTKYQAGVV GLALGAAVAA RLIDSRTTGE LTRSEVTAHI RGIAVAAGLA
LIVFALTTPF AILDMSSFRR SIASTMTQYA TNEGQGDFSG AWRLDGYARF FWEDGLLPSG
VLLMAAGLPF LARCAPRQTM ILIAAILVGL APLAPQTVHF MRNTLPVFPL LILLASGATI
SLGRAIGRLQ CLNSQPMKPQ TVSNRVLMTL PIILGASALI APQIQETTWR LSYWSRPYTL
VQAADVIRAE PRGMLAAVEA NPVQWANDPV VHPVDSVSDH PPEWYLSRGY RYLLLNEDRR
RNQENYARLL ESGMPLLVMP PRDLGLQPGP GGIVLDMGER IDLIPFTRRS ARFGDSIDLL
GYELQPGDLR SRITPLEGAN LRIFAPGQSL QLNLYWRALT RMDRNLVLFI HINNQYDQRV
AQRDLPLRLD DYPTSRWRVG ELVIDRGDMP LPPLPEGEYR LLIGLYDAET GVRLPVRDQT
AVELTTIRVI HTAPSSN
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