| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4011 |
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| Symbol | rplF |
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| ID | 5541521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5218095 |
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| End bp | 5218658 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896123 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001434062 |
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| Protein GI | 156743933 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000166589 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000686168 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCGCGTA TTGGAAAAAA ACCAATCCCG GTGCCACGCG GCGTCGAGGT GACGATTGCG
GAAGGGAACG TGGTGACGGT CAAAGGACCA AAGGGAACGT TGATCCAGCG CCTGCCGCCG
GAAATGATCA TTACGCATGA AAATGGCGTC ATTACGGTCG CGCGCCTTTC GGATCAGAAA
CAACACCGCG CCCTGCACGG GTTGACGCGC TCGCTCATTG CCAATATGGT AACCGGCGTT
ACAGAGGGGT ATCAGCGAGT GCTGGAAATA ACCGGCATTG GTTATCGTGC GGTGCGGGAA
GGGAAGAACC TGATCCTTCA GGTGGGATTT TCCCATCCGA TCCGTGTGAC GCCACCCGAA
GGCATCACCT TTGAGGTGAT GGAGCGTCGG AGCGCCAATG AGCCGCAACA GGTGATCATT
CGAGGTATCG ATAAGCAGAA GGTTGGCGAG GAAGCCGCAA AATTGCGCGC GTTGCGACCA
CCAGAGCCGT ATAAGGGGTA CGGCATCAAA TACCGCGAAG AGCGCGTGCG CCGCAAGGCG
GGCAAGGCAG GCAAAGCGCG CTAA
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| Protein sequence | MSRIGKKPIP VPRGVEVTIA EGNVVTVKGP KGTLIQRLPP EMIITHENGV ITVARLSDQK
QHRALHGLTR SLIANMVTGV TEGYQRVLEI TGIGYRAVRE GKNLILQVGF SHPIRVTPPE
GITFEVMERR SANEPQQVII RGIDKQKVGE EAAKLRALRP PEPYKGYGIK YREERVRRKA
GKAGKAR
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