| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4000 |
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| Symbol | |
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| ID | 5541510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5212020 |
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| End bp | 5212640 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896112 |
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| Product | ribosomal protein S4 |
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| Protein accession | YP_001434051 |
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| Protein GI | 156743922 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00226649 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000661916 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCGCT ATATTGGACC TGTAGGAAAA ATCAGCCGGC GCCTGGGCAT CGGCATCACC
GAAAAAGGGC AGCGGATACT GGCAAAACGT CCGTTCCCTC CTGGACAGCA CGGACCATCG
GCGCGCCGAC GGCAGGTGTC GGATTATGGC TTGCAACTGC TCGAAAAACA GAAGGCGCGG
TATATCTACG GCGTGCTGGA ACGGCAGTTC CGCCGTATAT TCGAGAAGGC GCAACGGTTT
CCGGGAGAAA CCGGTGCGTA TCTGTTGATA CTGCTCGAAC GGCGCCTTGA TAATGTTGTG
TATCGCCTCG GCTTCGCCAC GACGCGCGCG CAGGCGCGCC AACTCGTGAC CCATGGGCAC
ATTACGGTGA ACGGGCGCAA GACCAACATC CCGTCGTATA CAGTGCGTGT GGGCGAGACG
ATTGCTGTTC GACCGGAAAG CCGCCGCCGC ATGTACTTCA AAAACCTGGT CGAGAGCGGC
GCGCTTGCCA AACACAAAGC GCCAGACTGG TTGCGCCTGA ACCCGGCTGA TCTGTCGGGC
GAAGTAGTGG CAATGCCGCG GCGCGAAGAT GCTGAGCCGG GCATTAATGA ACAGTTGATT
GTCGAGTTCT ATAGCCGCTG A
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| Protein sequence | MARYIGPVGK ISRRLGIGIT EKGQRILAKR PFPPGQHGPS ARRRQVSDYG LQLLEKQKAR
YIYGVLERQF RRIFEKAQRF PGETGAYLLI LLERRLDNVV YRLGFATTRA QARQLVTHGH
ITVNGRKTNI PSYTVRVGET IAVRPESRRR MYFKNLVESG ALAKHKAPDW LRLNPADLSG
EVVAMPRRED AEPGINEQLI VEFYSR
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