| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3982 |
|---|
| Symbol | |
|---|
| ID | 5541492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 5192971 |
|---|
| End bp | 5193387 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640896094 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_001434033 |
|---|
| Protein GI | 156743904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03618] PPOX class probable F420-dependent enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0720616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATC GTGCCATTCA GGTTGCTGCG ATCCCGGAGT CGCACCGCGA TCTCCTCGAA
CGACCGTTGA TCATGATCCT GGCGACAACC CTGCCCGATA CTACACCGCA GGCGACGCCG
GTCTGGTTTC ATTTTGAAGA TGGGTATATC TACCTGAATA CTGCCGTTGG TCGGCTGAAG
GATCGCGCGA TCCGCGCGAA TCCGTATGTG GCGCTGGTGG TGGTGGACCC GGATAATAGC
TACCGTTACA TTCAGATTCG CGGGCCGGTC GTCGAGATCA ACGAAGAACA AGGACGCGCG
CACATCGACT ATCTGGCGCG GCGGTATACC GGTGCGGAGC GGTTTACGTC GAACCCGCCG
GATCAGCAGC GGGTTCGGTT CAAGGTTGCG CCGGAGAAGG TCAATGTGAT GGGGTGA
|
|---|
| Protein sequence | MNHRAIQVAA IPESHRDLLE RPLIMILATT LPDTTPQATP VWFHFEDGYI YLNTAVGRLK
DRAIRANPYV ALVVVDPDNS YRYIQIRGPV VEINEEQGRA HIDYLARRYT GAERFTSNPP
DQQRVRFKVA PEKVNVMG
|
|---|
| |