| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3959 |
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| Symbol | |
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| ID | 5541465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5165861 |
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| End bp | 5166889 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896067 |
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| Product | luciferase family protein |
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| Protein accession | YP_001434010 |
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| Protein GI | 156743881 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03617] probable F420-dependent oxidoreductase, MSMEG_2256 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.181743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG ATGCAACGCT GGTGGTTGAT GCGCGCCGAC TCAACGAGGC GGGCAAAATT
GCGCGCGCCG CCGAAGCCGT GGGGTTCGCT GCGCTCTGGA CGCCGGAAAC GCAGCATAAT
CCCTTTTTGC CGCTGACGCT GGCAGCCGAT CATACTGCCG AGATTCATCT GGGGACGGCA
GTGGCGATTG CGTTTGCGCG CAGCCCGATG GTGATGGCGC AGATCGCCTG GGACCTTCAG
GCGTTCTCTG GGGGACGCTT TATCCTGGGG TTGGGGACGC AGGTGAAGGC GCACATCGAA
CGGCGCTTCG GCATGACATG GGATCCGCCG GTTCCGAAAT TGCGTGATTA TATTCAGGCG
CTGCGCGCAA TCTGGCAGGC ATTCCAGACT GGCGCCAAAC TCGATTATCG CGGTCAGTTC
TACAACCATA CCCTCATGTC GCCCTTCTTT AACCCTGGTC CGATTGCCGA TCCCCACATT
CCTGTTTATA TCGCCGGGGT CAACGAAGGA TTGGCGCGTC TGGCAGGCGA GTTGTGCGAC
GGTTTTCACG TCCATCCCTT TCATAGTGTA AAGTATATTA ATGAGATTGT CCGACCGCAG
GTGGCGGCCG GCGCGGCAAA GGCGGGACGC GATCCGTCGC AGGTGAATCT GACGAGCAGC
GTGTTTCTCA TTACTGGTCC CGATGAGGCA AGTATGGAAG GTTCTCGCGC ATTTGTGCGC
GAACAGATTG CGTTCTATGC CTCGACTCCA ACCTACCGCG TGGTGCTGGC ATGTCACGGC
TGGGAGGACG TCGGCGAGCA GTTGTCGCGT CTGGCAGCCG CGCGGCGCTG GTCCGAAATG
GGGGCGCTGA TTACCGACGA TATGCTCGAT GTGTTCGCCG TCACGGCGCC GCTTGATCGG
ATCGGCAAGG CGCTGCGCGA ACGCTACGAC GGCGTCCTCG ACCGGGTCGG CAGTTACCTG
CCGTACACGC CAGGCCCGCT CGACGATGCG TGGCGGCAGG CGGTGCGCGA TGTGAGCAGG
GGGGAGTGA
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| Protein sequence | MKLDATLVVD ARRLNEAGKI ARAAEAVGFA ALWTPETQHN PFLPLTLAAD HTAEIHLGTA
VAIAFARSPM VMAQIAWDLQ AFSGGRFILG LGTQVKAHIE RRFGMTWDPP VPKLRDYIQA
LRAIWQAFQT GAKLDYRGQF YNHTLMSPFF NPGPIADPHI PVYIAGVNEG LARLAGELCD
GFHVHPFHSV KYINEIVRPQ VAAGAAKAGR DPSQVNLTSS VFLITGPDEA SMEGSRAFVR
EQIAFYASTP TYRVVLACHG WEDVGEQLSR LAAARRWSEM GALITDDMLD VFAVTAPLDR
IGKALRERYD GVLDRVGSYL PYTPGPLDDA WRQAVRDVSR GE
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