Gene Rcas_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3331 
Symbol 
ID5540829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4347661 
End bp4348410 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID640895448 
Producthypothetical protein 
Protein accessionYP_001433399 
Protein GI156743270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA TACGCTGTCC CCGCCCCTGC CCCACTGTTG CCGCCATGCG CCACGACTTC 
CATGCGTTGC GCAACCACCT CGCCGCTGGT CATCGTTGCG TCGATGCATG GCTGGCGCTG
GCGAAGTTGG TGACCGTTCC GGCGCACCGG CTTGATTGCC TGGCGCGCGC AAGCGCCCTC
GCGCCGGACG ATGTCGAACT GGAGATCGCG TATCTGGAAC AGCGTCTCAA TATTGATCCG
GGCGATGCCG AAGCAGCAGG AGCATTGCGC GCGGCGCGCG CGCGGCGCGC GTTGATAGGG
CACAAGCCGC GCCTGTTTAA GCAGATGGAT GCATCGCCAA CCCTGGGGTC CATTCTTGTG
CAAATGGGTG CGATCACACC GCAGGAACTG GAATGGCTCC TGGAGGAACA GGCAGCAATC
CGGCGGCGGG GCGAGCAGAT GATGTTCGGC GATATCGCCG TCGCGCGCGG CAAAGTGACG
CCGGAGACTC TGGCGCGCGC ATTGATGGTG CAGATTCAGC AGCGAGTCGA GAATGACGGA
GCGCCGCGCG CGCTGGGCGA GTACCTGATT GCCAACGGAT TGCCGCCAGA ACGTCTCGAA
CAGGCGCTGA CCGAACAAAT CTACCTGCGA CGGATCGGCA GGCGCGAAAC GCTCGGCGAA
ATCCTCTTGC GGCGGCGATG GGTTACGCGC GATCAGATCG AACGCGCTCT GGCGCAGCAG
CGTCAGGATG CGCTGTCGCT GTTCCGTTGA
 
Protein sequence
MNDIRCPRPC PTVAAMRHDF HALRNHLAAG HRCVDAWLAL AKLVTVPAHR LDCLARASAL 
APDDVELEIA YLEQRLNIDP GDAEAAGALR AARARRALIG HKPRLFKQMD ASPTLGSILV
QMGAITPQEL EWLLEEQAAI RRRGEQMMFG DIAVARGKVT PETLARALMV QIQQRVENDG
APRALGEYLI ANGLPPERLE QALTEQIYLR RIGRRETLGE ILLRRRWVTR DQIERALAQQ
RQDALSLFR