| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3093 |
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| Symbol | |
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| ID | 5540589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4010444 |
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| End bp | 4011496 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895212 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001433165 |
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| Protein GI | 156743036 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTGC TGGTGACGGG ACACAAAGGG TATATCGGAA CCGTGCTGAC GCCAATGCTG
CTCGAGCGCG GCTACGAGGT GCTGGGGCTG GATAGCGATC TGTTCGAGGA GTGTACATTC
GGTGCTCCGC CGGTGGATGT GCCGGAAATC CGCAAGGATA TTCGCGATGT CGAAGCAGAC
GATCTTGCGG GTGTCGATGC CATTATGCAC CTCGCCGGTC TGTCGAACGA TCCGCTCGGC
GACCTTGATC CGCAGTTGAC CTATGAGATC AACTATCTGG CGTCGGTGCG CCTGGCAATG
CTGGCGAAGC AGGCAGGCAT CACACGCTTT ATCTTCTCGT CGTCGTGCAG TACGTATGGC
GCAGCCGGCG ATGAGATGCT CGATGAAACC TCGCCGTTCA ATCCGGTTAC GCCCTATGGG
CGCTCAAAAG TGTTGGTTGA ACAGGACCTG GCGAAACTTG CCGATGCCGA TTTCAGCCCG
ACCTATCTTC GCAATGCAAC GGCTTACGGT GTATCGCCGC GTCTGCGCTT CGATCTGGTG
CTGAACAACC TGGTCGCCTG GGCATATACG ACGGGGCTGG TCTATCTGAA GAGCGATGGC
ACTCCCTGGC GTCCTATCGT GCATATTGCC GATATTGCGC GTGCGTTTAT CGCCGTGCTG
GAGGCGCCGC GCGAATTGAT CCACAATGAG GCGTTCAATG TCGGGCGTAA TGAGGACAAC
TACCGCATCC GCGACCTGGC GCAGATTGTG TATGAGACCG TGCCCGGTTG TCGCATTCAG
TTCGCCGAGG GCGCGCAGCC AGATAAGCGC AATTATCGCG TTGATTGCTC GAAGATACAG
CGTGTGCTGC CGGATTTTCA GCCGGCCTGG GATGCGCGCA AAGGCGCACA GGAACTGTAC
GACGCCTATC GCTCTATCGG GTTGACACTC GAAGATTTTG AAGGTCCACG CTACAAACGT
ATCGATCACA TTCGGAAACT GATTGTGTCG GGACGTCTCG ACTCGTCGCT GCGTCGCTCG
GAGCAGGCGC TGGCTGTTGG ATCGGCGCAA TAA
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| Protein sequence | MRVLVTGHKG YIGTVLTPML LERGYEVLGL DSDLFEECTF GAPPVDVPEI RKDIRDVEAD
DLAGVDAIMH LAGLSNDPLG DLDPQLTYEI NYLASVRLAM LAKQAGITRF IFSSSCSTYG
AAGDEMLDET SPFNPVTPYG RSKVLVEQDL AKLADADFSP TYLRNATAYG VSPRLRFDLV
LNNLVAWAYT TGLVYLKSDG TPWRPIVHIA DIARAFIAVL EAPRELIHNE AFNVGRNEDN
YRIRDLAQIV YETVPGCRIQ FAEGAQPDKR NYRVDCSKIQ RVLPDFQPAW DARKGAQELY
DAYRSIGLTL EDFEGPRYKR IDHIRKLIVS GRLDSSLRRS EQALAVGSAQ
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