| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2855 |
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| Symbol | |
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| ID | 5540344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3705244 |
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| End bp | 3707424 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894982 |
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| Product | cell surface receptor IPT/TIG domain-containing protein |
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| Protein accession | YP_001432942 |
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| Protein GI | 156742813 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTTCA TTTCTTTCAA TCTCTTCATC CGCGCGCTGA CCATCGTCAG TTTTGTCGTG
GGATTGATCG GCGGAATCGG TCTCATTCCT CGTCCGGTGC GCGCCAATGT GCAGCCATCC
TGCTCCACCA CGCCGCTCTT CACTAATGGC TCATTCATTA CAGGAACCGG CAACGGCGCG
AGCGGCGCCA ATACCAGCTC GCCCCAGGGC ACTGACACCG GTTTCGGATA CCTGGTCGAT
CCGACGCGCA CACAAACCGT CCCCGCCGGT CCCGCTCGCG CTCGCCTGGC GGACGATTTC
ACTGTGACCG GCAATGGGTG GCGTCCTTCT GCGATAACGC TCTACGCTTA TCAGATCAAC
AGTGGTACCA CATCGACCAT CACGGGAGTG GTCGACCTGC GTCTATGGAA TGGCGTCCCC
GGCGATGGCG GCGCAGTGAT CGCCGGTCCG GTGAATGGAA CAATCACAAA CAATAACTGG
ACAAATGTTT ATCGCGTGCC TGCTAATGAC CCAACGCAAA CATCCCGACC GATCATGGCG
GTGACGATCA ACTGGCCCTT TACTGTCACT ACCTTGCTGA CCGGAACCTA CTGGATCGAG
TGGGGCATGG CAGGCAATGA GAGCCTCAGC GGTCCCTGGG TTCCCCCCGT CAGCACCGGC
ACTACCAACA ATGCGCGCCA GCTCGATCTG ACCGGCGGCG AGCCGGGAAC CTGGGCGCCA
CGCGGTGACT ATACGAATAC CAGCAACATT GTTGAATTCC CGTTCGTCAT CTGCGGCTCG
GAGATACCCA CACCACAAAT TACAAGCCTG AGTCCGAACG CAGTAACCGC TGGCAGCGAT
GAGTTCACAC TGACGGTCAA CGGCAACGGC TTTATCGATG GCACAGGGTC GGATCGCTCG
GTCGTGCATT GGAATGGTAG TCCACGCGCA ACGACGTATA TCTCCAGCAC CCAACTGACC
GCGACCATCC CCGCCAGCGA CATCGCCACG GCAGGCACGG CGAGCGTGAC GGTCGTCAAT
CCAGGCAACG TTACATCGAA TACGGAAACG TTCACGATCA CCAACCCGAC GCCAGCGATC
AGCAGCCTCA GTCCGTCCAC CGCCGTCGCA GGCAGTTCCG GCTTCACCCT CACCGTCACC
GGCACGAACT TCGTCAACGG GTCGGTCGTG CGCTGGAACG GCAACGACCG CACCACTACG
TTCGTCTCCG GCGCCCAACT GACCGCGACC ATCCCCGCCA GCGACATCGC CACGGCAGGC
ACGGCGAACG TGACGGTCGT CAACCCTGCT CCCGGCGGCG GCGAATCGGG CGCAGCAACG
TTCACCATCA TCAACCCGAC GCCGACGATC ACGGCGATCA GTCCGTCGTC GGCCACGGCA
GGCGGTTCCG GCTTCACCCT CACCGTCACC GGCACGAACT TCGTCAACGG GTCGGTCGTG
CGCTGGAACG GCAACGACCG CGCCACCACG GTCGTCTCCA GCACGCAACT GACCGCAACC
ATCCCCGCCG GCGACATCGC CACAGCGGGC ACGGCGAACG TGACGGTCGT CAACCCTGCT
CCCGGCGGCG GCGAATCGGG CGCAGCAACG TTCACCATCA ACAACCCGAC GCCGACGATC
ACGGCGATCA GTCCGTCGTC GGCCACGGCA GGCGGTTCCG GCTTCACCCT CACCGTCACC
GGCACGAACT TCGTCAACGG GTCGGTCGTG CGCTGGAACG GCAACGACCG CGCCACCACG
GTCGTCTCCA GCACGCAACT GACCGCAACC ATCCCCGCCG GCGACATCGC CACAGCGGGC
ACGGCGAATG TGACGGTCGT CAACCCGGGT CCCGGCGGCG GCACATCCAA CACCGCGACA
TTCACCATTC AGGCGAGCAA CCCAACGCCG GTGATCGGCA GCGTCTCGCC AGACCTGATA
CCGGTGGGAG ACACAGATGT CGTTCTGACG GTCACCGGCA ACAACTTCGT TGCGAATTCG
GTGGTGCGCT GGAATGGAAC GTCGCTCACA ACGACATTCG TCAGCGCGAC GCAGGTGCAG
GCGACCCTCC CGTCAGCGCA ACGCAGCGCC GCAGGTGATG GAAGCGTCAC GGTCTTCAAT
CCGGCGCCCG GCGGCGGTGT GTCGAATGCG ATCACGGTAC CGGTGCGCTT CCAGGTGATG
CTGCCGCTGG TTGTACGGTG A
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| Protein sequence | MRFISFNLFI RALTIVSFVV GLIGGIGLIP RPVRANVQPS CSTTPLFTNG SFITGTGNGA
SGANTSSPQG TDTGFGYLVD PTRTQTVPAG PARARLADDF TVTGNGWRPS AITLYAYQIN
SGTTSTITGV VDLRLWNGVP GDGGAVIAGP VNGTITNNNW TNVYRVPAND PTQTSRPIMA
VTINWPFTVT TLLTGTYWIE WGMAGNESLS GPWVPPVSTG TTNNARQLDL TGGEPGTWAP
RGDYTNTSNI VEFPFVICGS EIPTPQITSL SPNAVTAGSD EFTLTVNGNG FIDGTGSDRS
VVHWNGSPRA TTYISSTQLT ATIPASDIAT AGTASVTVVN PGNVTSNTET FTITNPTPAI
SSLSPSTAVA GSSGFTLTVT GTNFVNGSVV RWNGNDRTTT FVSGAQLTAT IPASDIATAG
TANVTVVNPA PGGGESGAAT FTIINPTPTI TAISPSSATA GGSGFTLTVT GTNFVNGSVV
RWNGNDRATT VVSSTQLTAT IPAGDIATAG TANVTVVNPA PGGGESGAAT FTINNPTPTI
TAISPSSATA GGSGFTLTVT GTNFVNGSVV RWNGNDRATT VVSSTQLTAT IPAGDIATAG
TANVTVVNPG PGGGTSNTAT FTIQASNPTP VIGSVSPDLI PVGDTDVVLT VTGNNFVANS
VVRWNGTSLT TTFVSATQVQ ATLPSAQRSA AGDGSVTVFN PAPGGGVSNA ITVPVRFQVM
LPLVVR
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