Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2652 |
Symbol | |
ID | 5540134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3417756 |
End bp | 3419069 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640894775 |
Product | hypothetical protein |
Protein accession | YP_001432742 |
Protein GI | 156742613 |
COG category | [S] Function unknown |
COG ID | [COG3743] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTGC GTGAACGACT GCCGTCCGAC AACGAGACGC GCAGCGGCGA CTGGAATGAT GACACCCAAT GGCACGAGCG CGCCGCATTC CGTATCGCCG TCGAGTCGCG CGAAGTGAGC GAGGGAAGGT TGGTGTGGCG CACGCGCGCC TATCACGAAG AGCGCGATCA GCGCAGGGTC TGGACCGGTG CGCCGGATGA GGCGCTGATC GAATGGATCC ACGACCAGCT GCGACAATCG ATCGGTGGCG CTGTTCCATC ACCGCCCCGG CGTTTCCCCG CCAGTACAGC GTCTGTTGCG CCATCGTCCG ATGCTCCTGC TGACGATCTG CAACAGATTC CGGGGATCGG ACCGGCGATT GCGCGTCGCT TGCGCACAGC CGGCATTACC ACCTTCGCAG CGCTGGCAGC GTGCTCGCCG TCCGACCTGG CTGCCTGGAC GGGCCGCTCT GCGGAACAGA TCGTTCGAAT GGGATGGATC GAACGCGCTC GCGATCTGAC GCATCCGACG CCCCCGCTCG AAGCGACGGC AACGGAACCG TCGCCGGTCG AGACGGCAGC GGCGGCGCCA AGCACGAGCG GGGTTCAGAC CCGCCCTCCT CCCGCAACGG AACCGTCGTC GGTTGAAACG GCAGCCACGC TACCCGAAGC CCCGCCCGCC GCAGGAGACG CAACGGACGT GCAGCCGGTC GCAGAGACGC CGATAACCGA ACTCGCCGAA ACGACCACCG GGACATCTGG CGGGAAGGCA GCGCCGTCAG CAGCAGAAGA AATCCGGGAG GTGCAGAACA TGATCGAAGA AGCGCCGATT ATCTTTGCTG CCGTGCTACT CGACGAAGAG GGAGAGGTGC AGGACGCGCG TCTGACCACA ACCGGCGATC AACCGCCTGA GTGGAACGAT CAGCAGGTCG CGCGCTTTTT TATCGAAACT GCGACGCCGA TACCCCATGC AGCCGTGCCT GTTACGCTGT GGCTGGATCA TGTGCAGATC GATACAGTTT TCGCCCAACC GGGGAAAGGC GCCGCCTCTC GACTGCATGC GACCGCCATG CTGCACCTTG AATGGGCGGG GTCCGAAGAG ATACCGCGCG CATTTTGCCA CATCTTTCTC CTGGCATACG ATCTGTCCGC CGGTGAAACG CACATCCTGG GAACAACCAG GGTCGAGGCG GCGGTTGGCG CGGCGGATGT TCCGCTGACC CTCGATACAG ACCTGCCCGA GGTTGGCAGG TATCAACTGC TGCTGGCGGC GCTGATGCCG GAAGCGTCTG CACTGAGCGT TATTTCGGGT CCGCGACTGC GGGTGACGCC GTGA
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Protein sequence | MTVRERLPSD NETRSGDWND DTQWHERAAF RIAVESREVS EGRLVWRTRA YHEERDQRRV WTGAPDEALI EWIHDQLRQS IGGAVPSPPR RFPASTASVA PSSDAPADDL QQIPGIGPAI ARRLRTAGIT TFAALAACSP SDLAAWTGRS AEQIVRMGWI ERARDLTHPT PPLEATATEP SPVETAAAAP STSGVQTRPP PATEPSSVET AATLPEAPPA AGDATDVQPV AETPITELAE TTTGTSGGKA APSAAEEIRE VQNMIEEAPI IFAAVLLDEE GEVQDARLTT TGDQPPEWND QQVARFFIET ATPIPHAAVP VTLWLDHVQI DTVFAQPGKG AASRLHATAM LHLEWAGSEE IPRAFCHIFL LAYDLSAGET HILGTTRVEA AVGAADVPLT LDTDLPEVGR YQLLLAALMP EASALSVISG PRLRVTP
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