Gene Rcas_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2568 
Symbol 
ID5540050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3308056 
End bp3308655 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content61% 
IMG OID640894697 
Productmethyltransferase type 11 
Protein accessionYP_001432664 
Protein GI156742535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CGACGACACG TTTCCAGCGG CTCCAGCAAC GCTACCGCGA TGGTGATCTG 
CCGTGGGATC ACGATACACC GCCACCAGAG GTGATGGCGA TTGCCGAATC GCTTCCACCG
GGGCGGGCGC TTGACCTGGG GTGTGGCACA GGACGCGCCT GTGTCTACCT CGCAGCGCGC
GGCTGGCATG CGGATGGCGT CGATTTCATT CCCGAAGCGA TTGCCCGTGC TGAAGAACGG
GTTCACCACG CTGGCGTCGC CGACCGTGTG CGCCTGTTCA TCGCATCTGT CACCGACCTG
CACTTCTTGC GCGAGCCGTA TGATCTCGTG ATCGATGTCG GCTGTATGCA CGGCATGACC
GCCGAAGAAC TCTGCGCCTA TGCTGGCGAA GTTGCGCGCC TGACGCGATC CGGCGGTCTC
TATCTGCTCT TCGCGCATTT GCACGATGGA ACATCAAGCG ATACGCCGCG CTGGATCGCA
AAGGGGATGG TGGAACAATT ATTTGCGCCC GACTTTGAAG TCGAGCGCAT CGAATATGGC
GTTACTCACG TGTGTGATAC GAGTTGGCCC TCAGCGTGGT ACTGGCTGAG GCGCAGGTGA
 
Protein sequence
MTDPTTRFQR LQQRYRDGDL PWDHDTPPPE VMAIAESLPP GRALDLGCGT GRACVYLAAR 
GWHADGVDFI PEAIARAEER VHHAGVADRV RLFIASVTDL HFLREPYDLV IDVGCMHGMT
AEELCAYAGE VARLTRSGGL YLLFAHLHDG TSSDTPRWIA KGMVEQLFAP DFEVERIEYG
VTHVCDTSWP SAWYWLRRR