Gene Rcas_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2500 
Symbol 
ID5539981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3223208 
End bp3223609 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID640894630 
ProductMarR family transcriptional regulator 
Protein accessionYP_001432598 
Protein GI156742469 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.394742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAAC GGCACGGCTC CGATGATATG CCGACGATGG GGCAGATGCG CATGCTGGCC 
ATGCTGGCGG CGCGCCCGTG GAGTCTGAGC GAACTTGCTG CGGCACATCA GGTGACGCCC
TCATCAATGT CGCGCACGGT GGATGTGCTG GTGCAGCGCA CGTGGGTGGA GCGCACAACC
GCGCCAGACG ACCGACGGAA GGTGGTGCTG CGCCTGACCC CTGCCGGTTA TGCCGCACAT
ATCGCCATCC GCGACGCAGC CAGGGAAGCC GCTGCACGCC TGATCGAACA ACTCGATGAA
CGCCAGCGCG TGCATCTCCA CGAAGGATTG AGCGCGTTGC GCGAACTGGT CGATCATGCC
TGCTCGATGC CGATTGAGCC AGTATCAGGA GAGACCCGAT GA
 
Protein sequence
MRQRHGSDDM PTMGQMRMLA MLAARPWSLS ELAAAHQVTP SSMSRTVDVL VQRTWVERTT 
APDDRRKVVL RLTPAGYAAH IAIRDAAREA AARLIEQLDE RQRVHLHEGL SALRELVDHA
CSMPIEPVSG ETR