Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2500 |
Symbol | |
ID | 5539981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3223208 |
End bp | 3223609 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640894630 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001432598 |
Protein GI | 156742469 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.394742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCAAC GGCACGGCTC CGATGATATG CCGACGATGG GGCAGATGCG CATGCTGGCC ATGCTGGCGG CGCGCCCGTG GAGTCTGAGC GAACTTGCTG CGGCACATCA GGTGACGCCC TCATCAATGT CGCGCACGGT GGATGTGCTG GTGCAGCGCA CGTGGGTGGA GCGCACAACC GCGCCAGACG ACCGACGGAA GGTGGTGCTG CGCCTGACCC CTGCCGGTTA TGCCGCACAT ATCGCCATCC GCGACGCAGC CAGGGAAGCC GCTGCACGCC TGATCGAACA ACTCGATGAA CGCCAGCGCG TGCATCTCCA CGAAGGATTG AGCGCGTTGC GCGAACTGGT CGATCATGCC TGCTCGATGC CGATTGAGCC AGTATCAGGA GAGACCCGAT GA
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Protein sequence | MRQRHGSDDM PTMGQMRMLA MLAARPWSLS ELAAAHQVTP SSMSRTVDVL VQRTWVERTT APDDRRKVVL RLTPAGYAAH IAIRDAAREA AARLIEQLDE RQRVHLHEGL SALRELVDHA CSMPIEPVSG ETR
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