6 homologs were found in PanDaTox collection
for query gene Rcas_2447 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_2447  cupin 2 domain-containing protein  100 
 
 
251 aa  514  1.0000000000000001e-145  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.195222  normal  0.178688 
 
 
-
 
NC_014211  Ndas_5253  Cupin 2 conserved barrel domain protein  50.61 
 
 
247 aa  224  1e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.985232  normal  0.973954 
 
 
-
 
NC_014151  Cfla_3034  Cupin 2 conserved barrel domain protein  44.96 
 
 
244 aa  183  2.0000000000000003e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1009  hypothetical protein  45.8 
 
 
254 aa  170  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.253345  normal  0.620138 
 
 
-
 
NC_013093  Amir_4819  Cupin 2 conserved barrel domain protein  40.61 
 
 
239 aa  157  1e-37  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00745508  n/a   
 
 
-
 
NC_013521  Sked_05550  Cupin  37.41 
 
 
278 aa  150  2e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.564688 
 
 
-
 
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