Gene Ndas_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5253 
Symbol 
ID9249151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp415528 
End bp416271 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content77% 
IMG OID 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003683139 
Protein GI297564166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.985232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.973954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCC CGCGCGTGCC CGGGTTCCCC GGCGGCACCG CCGTCTCCCA CCTGCGGGTC 
TACGCCTGGC CCGCCGTCGA CGGTCGCGCC GGGGGCTCGC CCCACCTGCA CACCGCGTCG
GCGGAGGGCT ACGTGGTGCT CCGGGGCGAG GGCGTGCTGG AGACCCTGAG CGGCGCGGGG
TTCCAGCGGA CCCCGCTGCG GCCCGGCAGC CTGCTGTGGT TCACGCCGGG GACCGTGCAC
CGGCTGGTCA ACGACAGCGG CGACCTGGAG ATCCTGGTCG TCATGCAGAA CGCCGGTCTG
CCGGAGTCGG GCGACGCCGT GCTCACCTAC CCGGGCCGGG TCCTGGCCGA CCCGGACGCC
TACCGGCGGG CCACCGTGCT GCCCCTGGCC GTCACCTCGG CCGAGCGGGC GGCCCGGGAA
CGCCGGGACC TCGCCGTGGA GGGCTACCTG GAGCTGCGGG AGCGGGTGGA GCGGGAGGGG
CCGGACGCGC TGAAGGGGCT GTACCGGGCC GCCACGGAGC TGGTCCGGGA CCGGGCCGCC
GGATGGCGCC ACCACGTCGG CAGGGGCCCG GTCCACCAGG CGGGGACCAC CGTGCGGCAC
CTGGAGGCGC TGGGCCGGGG TGACGGGGAA CACCTCACCG ATTCGGCCGT CTACACCGCC
GACTCCCCTC CCGGTCCGCT GCGCAACGGC ATGTGCGGGC ACCTGCGGGT GTGGGACCTC
GACGGGGCGA GGAGGGCCGA CTGA
 
Protein sequence
MNAPRVPGFP GGTAVSHLRV YAWPAVDGRA GGSPHLHTAS AEGYVVLRGE GVLETLSGAG 
FQRTPLRPGS LLWFTPGTVH RLVNDSGDLE ILVVMQNAGL PESGDAVLTY PGRVLADPDA
YRRATVLPLA VTSAERAARE RRDLAVEGYL ELRERVEREG PDALKGLYRA ATELVRDRAA
GWRHHVGRGP VHQAGTTVRH LEALGRGDGE HLTDSAVYTA DSPPGPLRNG MCGHLRVWDL
DGARRAD