| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1945 |
|---|
| Symbol | |
|---|
| ID | 5539423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 2493536 |
|---|
| End bp | 2493931 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640894081 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001432052 |
|---|
| Protein GI | 156741923 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2445] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.755475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.160304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATT GTGATAGTGT GCCTGCAAAG GTGGCGATCA TCCAGCGCTG TCTCGACCGC
ATCCGGTCGG TCACCGGCAT GGACCCGGCG AGTCTTGATG ACATTGACCG GCATGATATT
GTTGTGCTCA ACCTGCAGCG CGCCGTGCAG TCTGCAATCG ATCTCTGCGC GCATACCTTT
GCAGCGCATG GATACGAGAT GCCGGCAACG CCGCGCGACA TTTTTGCGGC GCTTGAGCAA
CGGGGGCTTT TTTCCACTGC ATCGGCGCGG GCAATGCAGA AGATGTGCGG TTTTCGCACT
ATCGCCGTTC GTGACAATCG CAACCTTTCG CCGGATGTGC TCAAGGCGAT CCTGGTGCAT
CACCTGTTCG ATCTCGAAAC GTTGTTATAC CAATGA
|
|---|
| Protein sequence | MIDCDSVPAK VAIIQRCLDR IRSVTGMDPA SLDDIDRHDI VVLNLQRAVQ SAIDLCAHTF
AAHGYEMPAT PRDIFAALEQ RGLFSTASAR AMQKMCGFRT IAVRDNRNLS PDVLKAILVH
HLFDLETLLY Q
|
|---|
| |