Gene Rcas_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1758 
Symbol 
ID5539236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2261089 
End bp2261541 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content59% 
IMG OID640893897 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_001431868 
Protein GI156741739 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0855502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCGAACAGGA TGTGATCAAC CAGCATCAAG AGAGCGAATT CCCGCCGGTG 
CTCGAAATTA CGGAAGGCGC ATCCCTGCGC CTGCAAAGCA TGATGAAGGA ACGTAACCTC
GAAGGGTATG GTCTGCGCGT CTTCGTTTCC GGCGGCGGAT GCTCCGGCTT GCAGTATGGG
ATGACCTTCG ACAACGAGGA GCGCTTCGGT GATACAGTGT GGAATGCGCA CGGTCTGCGC
ATTATGGTGG ACCCGATCAG CGCGCGGTAC CTCACCGGCG CCACGATTTC GTACCAGCAG
GACAATATGC TGGCGGGCGC ATTCAAGATC GACAATCCGA ACGCAGTGTC GAGCTGCGGT
TGCGGTCACT CGTTCCGCAC GAAGGAACAG CAGGGGACCG ACGACGATTA CGACGGGTAC
GGCAACGGCG GCGGTTGTTG CAGCAGCCAT TAG
 
Protein sequence
MATIEQDVIN QHQESEFPPV LEITEGASLR LQSMMKERNL EGYGLRVFVS GGGCSGLQYG 
MTFDNEERFG DTVWNAHGLR IMVDPISARY LTGATISYQQ DNMLAGAFKI DNPNAVSSCG
CGHSFRTKEQ QGTDDDYDGY GNGGGCCSSH