| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1427 |
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| Symbol | |
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| ID | 5538900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1821565 |
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| End bp | 1822602 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893564 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001431540 |
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| Protein GI | 156741411 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.739034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCT GGCTCGCTTT TGTAGAGTTC CTCCAGCAGG TGCTGCTGAC GTTCTATGCG
TGGACGGGCA GCGCCGGTCT GGCGATTATT CTGTTTACGA TTGTTGCACG CCTGCTCATT
CTGCCGCTGA CGATTAAGTC GCTTCAGTCG TCGCGCAAGA TGCAGGAGTT GCAACCGCAC
ATGAAGGAAT TGCAGCGCAA ATACGGTAAG GATCCGCAGA AACTCCAGGA AGAGACGATG
CGGCTCTACC GCGAGTATAA GGTCAATCCA GTGGGCGGGT GTCTGCCGAT GCTCCTGCAA
TTGCCGATCT TTCTCGGTGT CTATCAGGCG GTGATCAATC TGACGCGCGT GTCGCCCGCC
GAACACGCTG GCAGTGCGAT GCTGCGCGTC CTCAATGAGC AGGGGATCGC CTTCAGCACT
GCAACGACTG CCACGCTTGG GCAGCCGCAA CTCGCGGGCA GTTTCCTCTG GCTGCCGGAC
CTGGGAAAAA CCGACCCGTA CTACATTCTG CCTATCCTCT CGGTGATCTT TCAGCTGATT
GTGCAACTGA TGGCGACGCC ACGCATCCAG GACCCGCAGC AGAAGGCGAT GATGCAGTCG
ATGCTGATTC TGCCGATTGT GTTTGGATAT ATCGGGTTTA TCTTCCCAAG TGGCGCGGTG
CTCTACTGGG TGGTCGGCAG CATTCTGTCG ATCATTCAGC AGTATGTGAT CTCTGGCTGG
GGTTCGCTGG CGAATTATCT CAAGTTTCTG CCGACCGATG GCGGTCTCCT TCCACCGATC
ACGCCGCCGG CGCAGTCGGC GGCATCGGCT GTCGGCGGCG GGAGTCCTGC TGCTTCAGAG
GAATCATCGC GCAAGGTTGA TTTTTGGGAC GTGCTCCGGC CACTGACCGA GGCGCGCAGT
GAGCCGGCTG AGCCGCAGTC GTTATCGTCC GGCAGCGCCG CACCCGTCGA AAGCGCCGCG
CCGACGGAAG CGGCGCGCGC GGAAGCGCGG CGTGTGTCGT CACAGATGAA TCCGCGGCGC
AGGCGGGCGC GCAGGTAG
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| Protein sequence | MPVWLAFVEF LQQVLLTFYA WTGSAGLAII LFTIVARLLI LPLTIKSLQS SRKMQELQPH
MKELQRKYGK DPQKLQEETM RLYREYKVNP VGGCLPMLLQ LPIFLGVYQA VINLTRVSPA
EHAGSAMLRV LNEQGIAFST ATTATLGQPQ LAGSFLWLPD LGKTDPYYIL PILSVIFQLI
VQLMATPRIQ DPQQKAMMQS MLILPIVFGY IGFIFPSGAV LYWVVGSILS IIQQYVISGW
GSLANYLKFL PTDGGLLPPI TPPAQSAASA VGGGSPAASE ESSRKVDFWD VLRPLTEARS
EPAEPQSLSS GSAAPVESAA PTEAARAEAR RVSSQMNPRR RRARR
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