| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1041 |
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| Symbol | |
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| ID | 5538507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1357692 |
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| End bp | 1358978 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640893178 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001431161 |
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| Protein GI | 156741032 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTGGC TGTACGGCGA AATGGCTTCC GCGATGCCCA AACCACGACT ATCCATCTGG
CGTCATCGTG ATTTTCTCCT TCTCTGGAGC GCCACGGCGG TCAGTCAATT GGGGACGCAG
ATCACCTTCC TCGCTCTGCC GTTCATTGCC GTCACTCTGC TGGACGCCTC GCCGCTGGAC
ACCAGCATCC TGGCAATGCT CGGATGGGCG CCGATGATTA CGCTTGGACT GGTCGCCGGC
GCCATTGTGG ACCGTATGCG CCGCCAGCCG CTCCTCATTG GGTGTGATGT GGCGCGGGCG
CTGGCGGTCG CCGCCATTCC CATCACGTAC CTAGCCGGCT GGCTCTCTCT CTGGCATCTC
TATGCGACCG TCCTGATCAC CGGGCTGTTC AGCACGTTGT TCGACCTGGC CTATCAGGCG
CGGCTGCCGA CCCTGGTTGC GCGCGACGAC CTGATCGCCG CCAATAGCGG GCTGGAACTG
GCGCAGTCCG GCACACGCAT CATCGGTCCC GGACTGACCG GCGCGCTGAT CGCCGTCTTC
ACTGCGCCGG TGGCGATCTT GTTCGATGCA CTGAGCTATC TGGCGTCGGC GCTGCTCCTC
CTGGGAATCC GCCAGCCGGA ACCGCCGCTC GTCGCGGCGC CCCGCGCGGG ATCGGTGACA
CACGTGCTAC GCCGGGAGAT GCGTGAAGGC ATGGTCAGTC TCTGGCGTCA ACCGTTGCTG
CGCACGCTGC TCGGCGCCAC ATTGGGCTTG AGCATCGGCT GGGCGCTGGT GGAGGGAATT
CTCATGTTCT ACATCGTGCG CACGCTAGCG CTGCCAGCGG AGGCGGCTGG CGCGGTCTTC
AGCATTGGAA ACATCGGGTT GCTGATCGCC GCCGCCCTCG CCAGCCAGGT GACGCGACGC
TGGGGCTTGG GTCCGGTCAT TGTCGGCGCG GCCGGGTTGC AGACGCTCGG ACTAGCGTTG
CTGGCGCTGG CGCCGCTGGC GCCGCTGGCA CTGCTCACCA CCGGGTATCT GATGCGGGCC
GCAGGAGTCG TGCTGTACAA CCTGAGCCAT CTGACCCTGC GCCAAAGCAT CACGCCGCTG
CACCTGCTGG GACGGGTGAG CGCCGCTGTG CGCGTCCTGG GGTGGGCTAG CATTCCGGTC
GGGCTGGTCG CTGGCGGCTG GCTGGCGACG CTGAGCGGGC CGTCAGTCGC AATCTGGAGC
GGCGCCGCGT TCAGCGCGCT GGCGCTTGTG CCGCTGGCGC TAGGGCGGAT CTGGCAGGTG
CGCACTGCGC CAGCCCCCGC CCCCTGA
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| Protein sequence | MHWLYGEMAS AMPKPRLSIW RHRDFLLLWS ATAVSQLGTQ ITFLALPFIA VTLLDASPLD
TSILAMLGWA PMITLGLVAG AIVDRMRRQP LLIGCDVARA LAVAAIPITY LAGWLSLWHL
YATVLITGLF STLFDLAYQA RLPTLVARDD LIAANSGLEL AQSGTRIIGP GLTGALIAVF
TAPVAILFDA LSYLASALLL LGIRQPEPPL VAAPRAGSVT HVLRREMREG MVSLWRQPLL
RTLLGATLGL SIGWALVEGI LMFYIVRTLA LPAEAAGAVF SIGNIGLLIA AALASQVTRR
WGLGPVIVGA AGLQTLGLAL LALAPLAPLA LLTTGYLMRA AGVVLYNLSH LTLRQSITPL
HLLGRVSAAV RVLGWASIPV GLVAGGWLAT LSGPSVAIWS GAAFSALALV PLALGRIWQV
RTAPAPAP
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