| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1024 |
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| Symbol | |
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| ID | 5538490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1333533 |
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| End bp | 1336034 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893163 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001431146 |
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| Protein GI | 156741017 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCATG CGCTGAGACC AATCGAGGAG TGGTTTGCGC GTCGCGGATG GACGCCTTTT
CCCTTTCAAC AGGAGGTCTG GCAGGCATAC CTGGCGGGCG AAAGCGGTCT GATCCATGCC
ACAACCGGCG CCGGGAAAAC ATACGCCGCC TGGCTGGGAG CAGTCGCCGA ATGGCTGGCT
GACAAGTCAT CAACCCGCAC AACGCCAGCG TTGCGTGTGC TGTGGATCAC GCCACTACGC
GCGCTGGTCG CCGATACCGT CGAAGCGCTA CGAGCGCCGC TCGATGACCT CGACGTTCCC
TGGCAGGTCG AAGCGCGCAC CGGCGACACG TCCGCCGCCG TGCGCGCCCG CCAGCGTCTC
CGGTTGCCGG CAGCGCTGGT CACCACCCCC GAAAGCCTCT CACTGCTGCT CACCCAACCC
GAATGGCGCG ATCTGTTCGC CGATCTACGG CTGGTGGTCG TCGATGAATG GCACGAACTT
CTCTCGACCA AGCGCGGCGT GCAGGTCGAA CTGGCGCTGG CGCGGCTGCG CGGGTTGCAC
CCCCATCTGC GCGTCTGGGG AGTGTCGGCA ACAATGGGAA ACCTGGACGC AGCGCTGGAT
GCATTGATCC CTGTGATCGA GGGGCAACCA TCGCGCGCCA GGATTGTGCG CGGTCTGCTT
CCGAAGCCGA TGGTGATCGA GACTCTGCTT CCCGAAACGA TAGAGCGTTT TCCGTGGGCA
GGGCATCTGG GGTTGACACT GCTGCCGCAG GTCGTGGCAA CGATTGAGCG GGGGAAAACG
TCGCTGGTAT TCACGAACAC GCGATCTCAG GCAGAGATCT GGTACCAGGC GCTACTAGAG
GCGCGTCCTG ATTGGGCAGG CATGCTGGCG CTCCACCACG GATCGCTGGA TCGCAAGGTG
CGTGAATGGG TCGAGGAAGC GCTGCGCGCA CGTCGCCTGC GGTGCGTAGT CTGCACCTCG
AGTCTCGACC TGGGAGTCGA TTTCTCGCCC GTGGATCAGG TCATTCAGAT CGGCAGCCCC
AAAGGAGTGG CGCGCCTGTT GCAGCGCGCC GGTCGCAGCG GACATCGTCC CGGCGCCGTC
AGCCGGGTGA CGTGCGCACC GGCGAGCGCC CTGGAGTTGA TCGAAATCGC GGCAGCCCGC
GACGCGATTG CGCAGGAACG GATCGAAGCG CGCCAACCGC TGGAGACGCC GCTTGATGTG
CTGGTGCAAC ATCTGGTCAC CTGCGCGCTG GGGGGCGGTT TCACCGCCGA CGAACTGCTC
GCCGAAGTGC GATCCACTCG CGCCTTTCGC CGTCTGAGCG ACGCTGAATG GCAGTGGGCG
CTCGACTTTG TGGTGCGGGG TGGCGCATCG TTGCACGCCT ACCCGGAGTT TCACCGCGTC
GTGAAACGCG ACGGTCGCTA TGTCGTAGCA AACGCGGAAG TTGCGCGTCG CCATCGGATC
AACATCGGCA CAATCGTAAG CGAGACGACA TTGAAGGTGC AGTACACGCG CGGCGGCGTG
CTCGGCGCGG TCGAGGAGTC GTTCGCAGCG CGGTTGAAAA CGGGCGATGT CTTCTTCTTC
GCCGGGAAGG CGCTCGAATT CGTGCAGTTG CGCGACACAA CCGTCTTTGT GCGCAAGGCG
GAACGGCGTG AAGGCGTAAC GCCGCGCTGG ATGGGCGGGC GCATGCCGCT GTCAACCGAA
CTATCGCGTG CCATTCGCGC CTGGATTGAA GAAGCGCGCA ATGGCATCTT GCGCGGCGCC
GAGATGGAAG CGGTGCGCCC ACTGCTCGAA GTGCAGGCGC GCTGGTCGCT GCTCCCCGAC
GCCGACGAAC TGCTGATCGA ACGCGTGCAG ACGCGGGAAG GGCATCACCT GTTTGTGTAC
CCTTTCGAGG GACGGCTGGC GCATGAAGGG ATGGCGGCGC TGATCGCATT TCGTTTGAGC
CGTCTGCGCC CGATCACCTT TACGATGGCG ATGAACGATT ATGGCTTCGA GTTGCTGGCG
CCAGAACCGG CGCCGCTTGA AGAAGCGCTT GGCGTGGTGT TCGATTCCGC GCGCGGCGCG
CAGCGATGGT CGATTGCCGG CGCAGACGCG CCGCTCTTCA GCGTCCAACG GCTGGCGGAC
GACATTCTCG CCAGCCTGAA CGCCACCGAG ATGATGAAGC GCCAGTTTCG TGAAATTGCC
CGGATTGCCG GGCTGGTGTA CGAAGGATAC CCTGGCGAAA AGAGCGCGCG CCAGGTGCAG
GCGTCGAGCA GCCTGATGTA CGATGTATTT GCGCAGTATG ATCCAGAAAA CCGATTGCTC
GAACAGGCGC GGCGCGAGGT GCTGGAGCGC CAGCTAGAGC AGAGCCGCCT TGCGGCAGCG
CTGGCGCGCG TCGCCGCAGG GCGGATTGTC GTGGTCGACA CACCGCGCCC GACGCCGTTC
GCCTTTCCGC TGCTCGTCGA CCGTTTGCGC GAAAGTCTCA GTTCCGAAAA ACTTGCGGAC
CGGGTGCGCA AGATGCAACT GGCGCTGGAA CGGGAAGCGT AA
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| Protein sequence | MHHALRPIEE WFARRGWTPF PFQQEVWQAY LAGESGLIHA TTGAGKTYAA WLGAVAEWLA
DKSSTRTTPA LRVLWITPLR ALVADTVEAL RAPLDDLDVP WQVEARTGDT SAAVRARQRL
RLPAALVTTP ESLSLLLTQP EWRDLFADLR LVVVDEWHEL LSTKRGVQVE LALARLRGLH
PHLRVWGVSA TMGNLDAALD ALIPVIEGQP SRARIVRGLL PKPMVIETLL PETIERFPWA
GHLGLTLLPQ VVATIERGKT SLVFTNTRSQ AEIWYQALLE ARPDWAGMLA LHHGSLDRKV
REWVEEALRA RRLRCVVCTS SLDLGVDFSP VDQVIQIGSP KGVARLLQRA GRSGHRPGAV
SRVTCAPASA LELIEIAAAR DAIAQERIEA RQPLETPLDV LVQHLVTCAL GGGFTADELL
AEVRSTRAFR RLSDAEWQWA LDFVVRGGAS LHAYPEFHRV VKRDGRYVVA NAEVARRHRI
NIGTIVSETT LKVQYTRGGV LGAVEESFAA RLKTGDVFFF AGKALEFVQL RDTTVFVRKA
ERREGVTPRW MGGRMPLSTE LSRAIRAWIE EARNGILRGA EMEAVRPLLE VQARWSLLPD
ADELLIERVQ TREGHHLFVY PFEGRLAHEG MAALIAFRLS RLRPITFTMA MNDYGFELLA
PEPAPLEEAL GVVFDSARGA QRWSIAGADA PLFSVQRLAD DILASLNATE MMKRQFREIA
RIAGLVYEGY PGEKSARQVQ ASSSLMYDVF AQYDPENRLL EQARREVLER QLEQSRLAAA
LARVAAGRIV VVDTPRPTPF AFPLLVDRLR ESLSSEKLAD RVRKMQLALE REA
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