Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1002 |
Symbol | |
ID | 5538468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1311104 |
End bp | 1311949 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640893145 |
Product | NERD domain-containing protein |
Protein accession | YP_001431128 |
Protein GI | 156740999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.435611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGTC TTATCCAGCA ACCCGATTCC ATACGCCAGG ACTTTTACCG TCGTATTCGG GCTAAAATCC AGTATGAGAA AAATGAATAT CAGCAGTGCA TCAATCGTGA TATGCCATTT CTTGGCGGTT TTATGAACGA ATTTACCGGT TTTATGTTTG AAATGGATCG ACTATGGAAT CACATGAAAG GAGCAACGGG AGAACATCTG GTTTTGCATG CTATTGCCAG ATTCCTGCCT CATAGTTGGG TGATTGCTCA GGGGGCAATC CTCGAACCTT ACCCGAACTG GTTTACCCAA ATTGACCATG TGTTGATTGG CCCTCCTGGT ATTTTCCTGG TCGAAACAAA AGCCTGGAGC GGCTCCTACT TCGTTCAAGG CGATAAATGG AAGAGGAAAG ATGGTCATTG CTGGGTTAAC TGCTCAAGCC CCACCAGACA GGCAGATTAT CACAGGAACA TGTGGCTTTT ATGGATGCAG CAGCATGTTT CAGGTGATTT CTATCGAAAG ATCATTCCTC TGATCCATTC CGTGATTGTT CTGACAAACA TTGAATGGAT CAAGGCGAAA TCGACACCTG TTCCGATTCT GATCGGTACA AGATGCCTGA TCAATTATCT CCTCTCACAA AAACAAATAG GACTACAGGC GTCGGAAATA GAAACCATAG CGCATCTTAC TGCATTTCAA CCTCGATATA ATCAACAGGT TCCACGATGT CCGAAGTGTC ATGCACTCAT GATCCCACGA CTTGCAAAGA AAGGACATCT CCAGGGAAAC TGGTTCTACG GCTGCCCAAA TTATCCTGCA TGTCGAGAGA TACACAGTAT ACAGAACATC CCGTGA
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Protein sequence | MARLIQQPDS IRQDFYRRIR AKIQYEKNEY QQCINRDMPF LGGFMNEFTG FMFEMDRLWN HMKGATGEHL VLHAIARFLP HSWVIAQGAI LEPYPNWFTQ IDHVLIGPPG IFLVETKAWS GSYFVQGDKW KRKDGHCWVN CSSPTRQADY HRNMWLLWMQ QHVSGDFYRK IIPLIHSVIV LTNIEWIKAK STPVPILIGT RCLINYLLSQ KQIGLQASEI ETIAHLTAFQ PRYNQQVPRC PKCHALMIPR LAKKGHLQGN WFYGCPNYPA CREIHSIQNI P
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