| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0938 |
|---|
| Symbol | |
|---|
| ID | 5538404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1245016 |
|---|
| End bp | 1245540 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640893087 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001431070 |
|---|
| Protein GI | 156740941 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.156043 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATGA CAGACGCGCC CTCAGCAACC GATATCGGTC ATCTGCTCGA CATGCTGGTG
CGTGAACAGC GCATCAAGCT CGAAATCACC GGCGGTGTAC CGACCTGGCG CCTGCTGCCG
AGTGTGCGCC ATCAAAAGGT CATTGATCGC ATCCGTGCAA GTATTACGCC GGTTTCGGAG
GTATCCGGCG GATGTGGCTG TTACCACCTG TCGGACGTGT CGCTCGTTTT TCCCGATGGA
TCGTACCGGC GTCCCGACAT TGCCATCTTC TGTATCGAAC CGCCCGACAT CGACGAGTCG
TGGGAATGCG TTCCAGAAGC AGTCATTGAG ATTGTCAGTC CAGGCTATTC TGAGAAGGAC
CTGAGCATCA ACCCGACCTG GTACATAGAT CAGGGCGTCA GAGATGTGCT GGTTGTCGAA
CCACGCGAAC GCTGGGTGCA ACATTTCAGC GCCGGTCGCC CGCCTGCCAC GCACCCATGG
CACTATACCG CCGAATTGCA CTGCGGTTGC CGGGTAACGA TCTGA
|
|---|
| Protein sequence | MGMTDAPSAT DIGHLLDMLV REQRIKLEIT GGVPTWRLLP SVRHQKVIDR IRASITPVSE
VSGGCGCYHL SDVSLVFPDG SYRRPDIAIF CIEPPDIDES WECVPEAVIE IVSPGYSEKD
LSINPTWYID QGVRDVLVVE PRERWVQHFS AGRPPATHPW HYTAELHCGC RVTI
|
|---|
| |