| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0880 |
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| Symbol | |
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| ID | 5538346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1151267 |
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| End bp | 1152154 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640893031 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001431014 |
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| Protein GI | 156740885 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000302502 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCTTCG ACCTGCATCG ATTGCGAATT TTTGCGACGG TTGCGCGTGC CGGAAGTTTC
ACCCGCGCCG CAGAACAGTT GCACATGGCG CAACCGACCG TTTCCCAGCA GATCAGCGCC
CTGGAAGATG CCGTAGGGGC GTCATTGATC GAGCGTAGTC CCCGGCGTCT GCGCTTGACG
CCAGCAGGTG AGGCGTTGCT ACCGTATGCC AACCGGCTGG CGCTGCTGGC GGACGAGGCG
TTGCAGGCGG CACGCGCGGC GGCTGGCGTT GCGGCGCACA CGCTCCGCCT GGGGGTCGGG
CAGACGCTGG CAACGTACCT GCTGCCGGAG ATTCTGCGTC GCTACCGTGA ACGCGCGCCA
CACTACCACA CCCGGATTGT GACCGGCAAC AGCGCCGCAC TGCTGGAGCA GGTCGCCGAA
GGAACTATCG AACTGGCGCT GGTCGGATCG CCCGCCACGC ACCCCGATCT GATCATCACA
CCATTCATGC AGGATCGCCT GGTGGTTATC GTCGCCCCCG ACGATATCTG GGCATCCCGC
GATACCGTAG ACATCAACGA ACTGCGGGAG CGCCCGTTGC TGACGCGCGA ACCGGGATCG
GCGCTGCATG CGACTGTCGA ACGGTTGCTG GGGGCTGCGA CGCTTGCCGG CGATCATGTG
ATCATGCTGG GCGAAACCGA AGCGATCAAG CGGAGTGTCG AGGTGGGGTT GGGTGTGGCG
CTGATCCAGG CGATTGCGGT GCAGCGGGAG GTAGCGCTGG GTCGGTTGCG CGTTCTGGCG
TTGCGCGGCA CCGACGACCG GCGCACCTAC GCCTGGGCGC GCCGCCAGCG CCCGTGGCTC
TCGCCAGCGG CGGCGGCGCT GGTGGAGTTG CTCTCCATCC ATCGGTAA
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| Protein sequence | MSFDLHRLRI FATVARAGSF TRAAEQLHMA QPTVSQQISA LEDAVGASLI ERSPRRLRLT
PAGEALLPYA NRLALLADEA LQAARAAAGV AAHTLRLGVG QTLATYLLPE ILRRYRERAP
HYHTRIVTGN SAALLEQVAE GTIELALVGS PATHPDLIIT PFMQDRLVVI VAPDDIWASR
DTVDINELRE RPLLTREPGS ALHATVERLL GAATLAGDHV IMLGETEAIK RSVEVGLGVA
LIQAIAVQRE VALGRLRVLA LRGTDDRRTY AWARRQRPWL SPAAAALVEL LSIHR
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