Gene Rcas_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0537 
Symbol 
ID5538000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp715632 
End bp715979 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content51% 
IMG OID640892699 
Producthypothetical protein 
Protein accessionYP_001430685 
Protein GI156740556 
COG category[S] Function unknown 
COG ID[COG4634] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTC TTGTTGATGA ATGCACGGGT CCAGCAGTAG TGCGCTGGTT ACACGAACAG 
CAGCACGACG TTTTCTCGGT GTACGATGAG GCCCGCGGCA TGGACGACGA TGATGTGATT
GCGAAAGCGT ACAGTGAGAA TTGGATTTTG ATCACGAATG ACAAAGACTT CGGCGAGGAA
GTATACCGGG AGAAACGTCT GCATAGAGGT GTTGTGCTTT TGCGCCTTGA AGATGAACGA
GCGGCGAGTA AAATTGCCGT CCTTCAGCGT TTGCTTGGAG GCTACGCTGA ACAATTGGCA
GACCGATTCG TTGTGGTTAC GGAAAGACAG GTGCGTTTTG CTCAATGA
 
Protein sequence
MRFLVDECTG PAVVRWLHEQ QHDVFSVYDE ARGMDDDDVI AKAYSENWIL ITNDKDFGEE 
VYREKRLHRG VVLLRLEDER AASKIAVLQR LLGGYAEQLA DRFVVVTERQ VRFAQ