| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0465 |
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| Symbol | |
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| ID | 5537928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 592971 |
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| End bp | 594431 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640892628 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001430614 |
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| Protein GI | 156740485 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.216322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.610525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAA CGTTTATGCG CACAATGCTC AACCAAAAGA GGCGTCACCT GAAGAGCAGC
CTGACAGCAC GACAACCCCT TCCTGTATTT CGTTCCTTCC TGATAGTCGG CGTGTTGCTC
GGCATTGTCG GATTGAGCCT GGCGGCTGGG TACGTCATCG GCGCCGATCG GAAATTCGTC
GCGCTGGCGA TCTTCGGTCC GCTGGCGGCG ATACCGGTTT TCTTTCTTGT CAGTCGGCAT
TTTACCTATG CGATACTGTC TTTGCCCATA GCAGCAATGG CGATCCCGAT TGATATACCG
ACGGGAACGT ATACGAAAAT ACCGATCTCA CTGGTTATTG CAACAATGCT CTGCGGTATA
TGGATCACGT CGATGGCGAT CCGCAACAAT TGGCGACTGG CGCCGTCGCC GATTAACCGT
CCAATGATCG TATTCTGCAT TGCCTGTACG ATATCGTTGA TATGGGGAAT TGTATGGCGT
GATCCTATAC TACGGATGGA TATATTTTCG AACTTCATCG TTGTTCAGAT CGCTTCTCTC
GTTACTTATG CAGTTTCTGT CGGGGTTGCG CTGTTGATCG GTAATTTTCT TTGGAATGAG
GGTCAAATCA AGTATCTTAT CGGTTGCTTT TTGTTTTTTG GGTCGCTCAT GACCATATTT
CAAATCTTGA GGATCGATCA TAGAATCCTT ACAGACCGTG GATTATGGGG ATTATGGACG
GTTATTCCTG CTTATGCGCT GCTGATTACG CAACCCGGCT TGCGCTTGCG TTGGAGATTG
CTTCTGCTGG CGCTCATTGT CGCTAATCTG TATCAAACGA TCCTGATCAA TCTGCTCTGG
AAATCGGGAT GGATTCCGAC GGTTATTGCT ATCTTTGCAG CGACATTGAT CCGTTCACGG
CGTTGGTTCG TTGTGCTGGC CGTTGCAGTG ATTGTGTTGG TATACACACA ACAAGATTTT
TTCAATCAGA TGATCGAAAC AGAGTTGAAC GAAGGCGCCG ATGGTCGGAT CGGTATGTGG
GAGATCAATC TGCGCGTGGT TGGCGAACAT TGGCTGTTCG GCACCGGTCC TGCCGGGTAT
GCGCCGTACT ATATGACCTA CTACCCCTAC GATGCGCGCT CGACGCACAA CAACTATCTC
GACATCATTG CTCAGTTTGG CGTGGTTGGT TCGATAATCT GGCTCTGGTT CGCGTTTGCC
AGCACAAGCG AAGGTTTGCG CCTCTACCGT GAAGCGCCGC CTGGATTCCT CAAAACCGCA
GCATTGACCA CGGTCAGCGG TTGGATCGGC GCGCAGGCAT CGATGTTCTT TGGTGACTGG
ATTCTGCCGT TTGCCTACAA CCAGACGATT AACGGCTTCA AATACACGGT TTATAGCTGG
TTTTTCGTCG GTCTCCTGAT CAGCCTCCGG CAGATCATTG AGCGGCGCAA AGCGACCCAA
ACGGTGAGCA ATAGCGTATG A
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| Protein sequence | MSATFMRTML NQKRRHLKSS LTARQPLPVF RSFLIVGVLL GIVGLSLAAG YVIGADRKFV
ALAIFGPLAA IPVFFLVSRH FTYAILSLPI AAMAIPIDIP TGTYTKIPIS LVIATMLCGI
WITSMAIRNN WRLAPSPINR PMIVFCIACT ISLIWGIVWR DPILRMDIFS NFIVVQIASL
VTYAVSVGVA LLIGNFLWNE GQIKYLIGCF LFFGSLMTIF QILRIDHRIL TDRGLWGLWT
VIPAYALLIT QPGLRLRWRL LLLALIVANL YQTILINLLW KSGWIPTVIA IFAATLIRSR
RWFVVLAVAV IVLVYTQQDF FNQMIETELN EGADGRIGMW EINLRVVGEH WLFGTGPAGY
APYYMTYYPY DARSTHNNYL DIIAQFGVVG SIIWLWFAFA STSEGLRLYR EAPPGFLKTA
ALTTVSGWIG AQASMFFGDW ILPFAYNQTI NGFKYTVYSW FFVGLLISLR QIIERRKATQ
TVSNSV
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