| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0420 |
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| Symbol | |
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| ID | 5537882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 532661 |
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| End bp | 533449 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892582 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001430569 |
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| Protein GI | 156740440 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0643104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAG CGCTCATCAT TCTGGAGAAA GAATGGCTCG AACTGCGCAG TGAACGCACC
CTATGGATGA CGATCCTGAT CCCGCCCTTG CTGCTGACGA TTCTGCCCAT CGTGGCGGTG
TATCTGATTG GCGTCACACC CGATGAGGAC ACCGCTCAAC TCGGCGCCAT CGTCGCCGAT
CCGTCGCTTG CCGGGTTACC GGAACCAGAG TTGGGACAGG CAGTGATGGG GAAGCAGTTT
GGGTCGATGT TTCTATTGAT GCCGTTGCTC ATTCCCTCGG CAATCGCCTC GTACAGTATT
GTTGGCGAGA AGACACGTCG CACGCTGGAA CCGCTTCTGG CAGCGCCGAT TGAGACATGG
GAACTGTTAC TTGGCAAATG CCTGGCTTCC CTTGTCCCAT CCATGCTGAT CAGTTGGGGA
TGTGCATTGA TATTCGTCCT GGCGCTGCGC CTGGTCGTCC TCAGTGATCG GGTGTACCAG
GTCATCCTTG AGGGTGGGTG GTGGGTGCTG CTGCTGCTCG GCTCACCGTC GCTGGCATTG
CTCATGGTTG CAGCGACCGT CGCGGTTTCG GGGCGGGTCA ATGATCCGCG CACCGCACAG
CAAGTTGCAG CCGTTGTGGT TGTGCCGATC CTGGCGCTTT TCGTGGCGCA GTTGCTCGGT
GTGGTGGTGC TGACGCCGTT GCTGGCGTTC ATTGCGAGCG CGGCGCTGGC ATTCCTGGCA
GCACTCGCCT TTGCCGGCGC CATTGCTCTG TTTGAACGTG AAAATATCTT AACCCGCTGG
ACTTCCTGA
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| Protein sequence | MRKALIILEK EWLELRSERT LWMTILIPPL LLTILPIVAV YLIGVTPDED TAQLGAIVAD
PSLAGLPEPE LGQAVMGKQF GSMFLLMPLL IPSAIASYSI VGEKTRRTLE PLLAAPIETW
ELLLGKCLAS LVPSMLISWG CALIFVLALR LVVLSDRVYQ VILEGGWWVL LLLGSPSLAL
LMVAATVAVS GRVNDPRTAQ QVAAVVVVPI LALFVAQLLG VVVLTPLLAF IASAALAFLA
ALAFAGAIAL FERENILTRW TS
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