| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0873 |
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| Symbol | hrpB |
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| ID | 1223180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1099107 |
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| End bp | 1100540 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240733 |
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| Product | regulatory HRPB transcription regulator protein |
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| Protein accession | NP_522434 |
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| Protein GI | 17549094 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.31701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0121893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGAA ACATCTACTT CGCCCTGGCC TCAGGCCTCG CCGCCCGCGA GCGCCTGCCC
GAATACGCAA ATGCGGTTTT CGCCGCTGAT TTCGACCGTG CGTATCAGCT CGTCGACCAC
CACTCCTCCC AGCGAGGAAA GTCCGACGAC TACGCGGGCG TGCTGGCGAT GGCCGATGCC
TCGCTGCTGC TCGAGTGCGA TGAAGAAGCG GAAGAAGGCT TCCGCCTGGC GCAGCGCCTG
ATCCGCCATT CGGATGACCA GCTGCGCGTG GTGTCGTGCC GCAATACCGG CTGGCAGGCA
CTGCTGCGCG ATCGCTACGC CGCGGCGGCG AGCTGCTTCT CGCGCATGGC CGAAGACGAT
GGCGCGACCT GGACCCAGCA GGTCGAGGGC CTGATCGGCC TGGCGCTGGT GCATCACCAG
CTCGGCCAGC AGGATGCCTC CGACGACGCG CTGCGGGCGG CGCGCGAGGC CGCAGACGGC
CGCAGCGATC GCGGCTGGCT GGCCACCATC GATCTGATCA TCTACGAATT CGCCGTGCAG
GCCGGCATCC GCTGCTCCAA CCGCCTGCTC GAGCATGCGT TCTGGCAATC GGCCGAAATG
GGCGCGACCC TGCTGGCCAA CCACGGCGGC CGCAACGGTT GGACGCCGAC CGTATCGCAG
GGCGTACCGA TGCCGGCGCT GATCCAGCGC CGCGCCGAAT ACCTCAGCCT GCTGCGCCGC
ATGGCTGACG GGGACCGCGC GGCAATCGAC CCGCTGATGG CGACCCTCAA CCACTCGCGC
AAGCTCGGCA GCCGCCTGCT GATGCAGACC AAGGTGGAAG TCGTGCTGGC CGCGCTGAGC
GGCGAGCAGT ACGACGTCGC CGGCCGCGTC TTCGACCAGA TCTGCAACCG TGAGACCACC
TACGGCGCGC GCCGCTGGAA TTTCGACTTC CTCTACTGCC GCGCCAAGAT GGCCGCCCAG
CGCGGCGACG CGGCCGGCGC GCTGAAGTTC TACACGACCT ACATGCAGGA CGCGCTGCGC
TGCCTGCGCA CCGAGACGGT CAACGTGCGC CGCGCCAGCG CCGCCGTGCC CGTCGCCTCG
CGCGCCTCCG ACGACGTCAG CGCGCGGCTG TCCGCCAAGT ATCGCCGGGC CTATCGCTAC
ATCATCGAGA ACATCGAGCG CAGCGACCTG ACCACGCGCG AGGTGGCCGC CCATATCAAC
GTGACCGAGC GCGCGCTGCA GCTGGCGTTC AAGAGCGCGG TGGGCATGTC GCCCAGCTCG
GTCATCCGGC GCATGCGGCT CGAGGGCATC CGCTCCGACC TGCTCGACAG CGAGCGCAAT
CCGTCCAACA TCATCGATAC CGCGTCGCGC TGGGGCATCC GCAGCCGCTC GGCGCTGGTC
AAGGGCTACC GCAAGCAGTT CAACGAAGCC CCCTCCGAAA CCATCTGGCG CTGA
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| Protein sequence | MLGNIYFALA SGLAARERLP EYANAVFAAD FDRAYQLVDH HSSQRGKSDD YAGVLAMADA
SLLLECDEEA EEGFRLAQRL IRHSDDQLRV VSCRNTGWQA LLRDRYAAAA SCFSRMAEDD
GATWTQQVEG LIGLALVHHQ LGQQDASDDA LRAAREAADG RSDRGWLATI DLIIYEFAVQ
AGIRCSNRLL EHAFWQSAEM GATLLANHGG RNGWTPTVSQ GVPMPALIQR RAEYLSLLRR
MADGDRAAID PLMATLNHSR KLGSRLLMQT KVEVVLAALS GEQYDVAGRV FDQICNRETT
YGARRWNFDF LYCRAKMAAQ RGDAAGALKF YTTYMQDALR CLRTETVNVR RASAAVPVAS
RASDDVSARL SAKYRRAYRY IIENIERSDL TTREVAAHIN VTERALQLAF KSAVGMSPSS
VIRRMRLEGI RSDLLDSERN PSNIIDTASR WGIRSRSALV KGYRKQFNEA PSETIWR
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