| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0558 |
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| Symbol | tISRso16b |
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| ID | 1222865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 699723 |
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| End bp | 700565 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637240418 |
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| Product | ISRSO16-transposase ORFB protein |
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| Protein accession | NP_522119 |
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| Protein GI | 17548779 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.269801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCGCGACC GCTACCGTGT GAGCCTGACC AAGGCTTGCG CGTTGTTTCA CATGTCGCGC
TCGCTGTACG GGTATCGCTC GGTTGCTCGC GACTCGTCGG CACTGCTTGC GCGCATCAAA
GAGATTGCGG CCAGTCGCGT GCATTACGGC TATCGCCGTG TGCATGTGAT GCTGCAGCGG
GAAGGCTGGA GAGACAATCA CAAACGCGTC TATCGCTTGT ACCGGGCCGA AGGTCTGTCG
CTGCGGCATA AGCGCCCCAA GCGCAACAAG TCGGCGCGGC TACGCCAGCC CAAGAGCATC
GTCACGGCCA TCAACGAAAT CTGGAGCATG GACTTTGTAT CCGACGCGTT ATTCGACGGC
CGGCGCCTGC GCGCATTGAC GGTCGTGGAC AACTACACCA GGGAATGCCT GGCCATCGAA
GTCGGCCAAA GCCTGAAGGG GGAAGACGTC GTGCGAGTGC TCAATGCCGT TGTTGCCCAG
CGTGGCTCAC CCCAAACCAT CAAGGTGGAC AATGGCAGCG AGTTTGTCTC GAAGGCGATG
TACCGGTGGG CGTACGAGCA CGGCGTGGAA CTCGACTTCA GTCGGCCAGG CACGCCTCCT
GACAATGCCA AGGTGGAAAG CTTCAACGGG CGGTTCCGGC AGGAATGCCT GAACGAGCAC
TGGTTCTTGT CCCTGGAGGA TGCTCGGGGC AAAATCGCCG ACTGGCAGCG GTACTATAAC
GAGAGTCGTC CCCACTCCGC GCTGCAGTGG GCGGCACCCG CCGAATTCGC CCATCAGGCA
ACGAAAAACG CCTCGACGGA CGACTCAACG ACGCCGGAAA TCTCCACTTC TGGACGGTAC
TAA
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| Protein sequence | MRDRYRVSLT KACALFHMSR SLYGYRSVAR DSSALLARIK EIAASRVHYG YRRVHVMLQR
EGWRDNHKRV YRLYRAEGLS LRHKRPKRNK SARLRQPKSI VTAINEIWSM DFVSDALFDG
RRLRALTVVD NYTRECLAIE VGQSLKGEDV VRVLNAVVAQ RGSPQTIKVD NGSEFVSKAM
YRWAYEHGVE LDFSRPGTPP DNAKVESFNG RFRQECLNEH WFLSLEDARG KIADWQRYYN
ESRPHSALQW AAPAEFAHQA TKNASTDDST TPEISTSGRY
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