Gene RSp0394 details

Gene Information

• Locus tag: RSp0394
• Symbol: fliJ
• ID: 1222701
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 499183
• End bp: 499650
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637240254
• Product: flagellar protein
• Protein accession: NP_521955
• Protein GI: 17548615
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.137594
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCACCA CGCACAAGCC GTTCCGCCTT GAAACCGTGC TGGAGCTGGC GAAAAAGGAC 
ACCGAAAAGG CCACGCAGGA AGTCGGCCGC CTGATGAACA CGCGTGAGCT GGCCGCGCAG 
AAGCTGGCGA TGTTGTCCGA CTACCGCAAC AACTACCGCC AGCAGATGCA GGTCAACGCC 
GAGGGCGGCA TCGACGCCGC CCGGCTGCAC AACTACGCCG CCTTCATCGA CCGCCTGGGC 
TCGGCGGTCG ACCATCAGCG CGGCACCATC AGCGCGCTGG AGGCGCAGTT GCAGCGCAGC 
CGTGACAACT GGCTGGAGAA GCAGCGCCGC GAACAGTCGT TCGACATCTT GCGCCAGCGC 
CATGTCGAAG AGCAGCGCCA GGACCAGGAG CGCCGCGCCC AGCGCGAAAA CGACGAACAC 
GCCGCCAAGC TGATCCGCAT GCGTGCGGCG CAGGCCGGCA GCAACTGA 

 

Protein sequence

MTTTHKPFRL ETVLELAKKD TEKATQEVGR LMNTRELAAQ KLAMLSDYRN NYRQQMQVNA 
EGGIDAARLH NYAAFIDRLG SAVDHQRGTI SALEAQLQRS RDNWLEKQRR EQSFDILRQR 
HVEEQRQDQE RRAQRENDEH AAKLIRMRAA QAGSN